Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq124 206 3e-48 seq99 89.7 6e-13 seq59 87.8 2e-12 >seq124 Length=198120 Score = 206 bits (228), Expect = 3e-48 Identities = 1099/1726 (64%), Gaps = 51/1726 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||||||| ||||| ||||||||| | |||||| ||||| ||||| | || ||| Sbjct 125168 GTTCATCGATTGAGATTGATCGATGTAAGCACCACGGTCAGCGGCCATCTGGACGATTGT 125227 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| || |||||||| |||||||| | | |||||| ||| | || |||| Sbjct 125228 TCGTTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGGATGTTGGG 125287 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 ||||| || ||||| |||||| | | ||| | | |||||| | | ||||| || Sbjct 125288 AATGTTCTGGATAGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCATAG 125347 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCA 109737 ||| | | |||||| | | || ||| |||||| || |||||||||||| Sbjct 125348 ACCCATATCGACGAGATCCTTCAGGAGCCATGG--GTTGACGACCTGGAATTCACCAGCA 125405 Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797 || || || ||||||||| | ||||| || ||||| ||||| ||| ||| || Sbjct 125406 AGAACACGACGAGAGTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGA 125465 Query 109798 ATTTGTGCAGTGGAA---GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCC 109854 ||||| | ||| | || || ||||||||||| | ||| | ||||| || | ||| Sbjct 125466 ATTTG---ACTGGTACTGGCAGTTGGCATGGGAGCAACGAGCAAGCTGTTGCGAACACCG 125522 Query 109855 TTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCA 109914 | | ||| | | ||| || | ||||| || | | | || ||| || Sbjct 125523 TGCTGCTTGATCTGCTGCTTCAAGGTATCCCAGTCCCAGAGGTCGGTA---GGAGTGACA 125579 Query 109915 CCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCG 109974 | ||||||| || ||||| |||||| | | || ||||| | | | ||||| Sbjct 125580 C---CCCACATGTCATACTGAAGCTCACCCTTGGAGACGGGTGAACCTTCGTATGTCTCG 125636 Query 109975 TACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTC 110034 || | || | ||||| ||| | ||| ||||| || || || || || || ||| Sbjct 125637 TATGGTCCGTGAACCTTGGCAAGCTCAACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTC 125696 Query 110035 TCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAG 110093 || || || || || | | | | ||| | ||||||| ||||| | | | Sbjct 125697 TCGAAGATCTGGATGTTGAGGTGCTTGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCC 125756 Query 110094 AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA 110153 || ||| |||| || ||||| || ||||||| | |||| || || || | ||| | Sbjct 125757 AAGAAA-GCATCAGCAAGACCTTGGACACCGACAGCAATAGGTCGGTGACGGAAGTT-GC 125814 Query 110154 GCGTCGAGCAGTTTC---TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTT 110210 | || | | || || ||||| ||||| || |||| | || || ||||| Sbjct 125815 TCTTCTTG--GCCTCGGGGACAGGGTAGTAGTTGACATCAATGATCTTGTTCAGGTTCTT 125872 Query 110211 CGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTC-TCCTTAT 110269 ||| || || ||| ||||| || | | ||| | | | | || | | | Sbjct 125873 GACGACAACCTGGCAGACTTCGTGGAGCTTCGCAAAGTCGTA-GGTACCATCGTTGGTGT 125931 Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329 |||| || |||||||||||| || || | ||||| |||| ||| || | Sbjct 125932 TGACGTAGGTGGGGAGAGCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCAC 125991 Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 ||| |||| ||| || || || | |||||| || ||| || | ||||||||| | Sbjct 125992 AGTACTCCACAATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGT 126051 Query 110390 T-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 | | ||| | ||||| |||||||| ||||||||| |||| | ||||| || |||||| Sbjct 126052 TGCTCTTTCTA-TTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGT 126110 Query 110449 GACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTT 110506 | || | |||| | ||| | | || || | ||||| | | |||| Sbjct 126111 GCCTCCAAGATGGAGTACCAAAGTTTCTGTGCCTTGATGGTCTTGCG--ACCCTTGCCTT 126168 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 | ||||||||| ||| | |||| || || | || || ||||||| | | ||| Sbjct 126169 CACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCATAGACATCAGCCA-AGCCT 126227 Query 110567 TCGC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625 || || || ||| || | | | ||| | |||| || |||||| | ||||||||| Sbjct 126228 GGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAG 126287 Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGG 110685 || ||||| ||||||| || |||| || ||||| || | || || | || ||| Sbjct 126288 AGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGG 126347 Query 110686 TTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG 110745 || || || || | | || | || ||| | ||||||||| ||||| |||| ||| Sbjct 126348 TTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCG 126407 Query 110746 A-------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 | ||| || ||| | | || | |||| || || | || ||| ||||| Sbjct 126408 AAAGCACCTGG-TCTCTT--GTTG-CCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAA 126463 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 ||| | ||||| |||| || || | ||| | || || || ||| ||| || Sbjct 126464 GACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACC 126523 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT--TTGT 110916 | |||||||| ||| | || | ||| || ||||| || ||| || | | Sbjct 126524 GGTAGCACGAATTCGGTGAACATTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGC 126583 Query 110917 GCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 ||| | ||| | | |||| | || ||||| ||||| ||| | || || | || || Sbjct 126584 GCA-AGTCT-TCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGG 126641 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 ||||| ||||| | || | | || || || || ||| | || || | ||||| Sbjct 126642 AAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGG 126701 Query 111037 ATGAA-CAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACC 111095 |||| || | ||||||||| ||||||||| |||| || | | ||||| ||| Sbjct 126702 GTGAAGCACTTC-TGGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACC 126760 Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATC 111155 ||||||||||| || |||||||| | ||||| ||| || ||| | |||||| || Sbjct 126761 GTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCTCGCAGATCTTTCCGTC 126820 Query 111156 AACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 | || | ||||| ||| || ||||||| || |||||| Sbjct 126821 CAGGCGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCGAAGTAT 126866 >seq99 Length=1752785 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1006645 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1006704 Query 136777 GGGAACA 136783 |||| || Sbjct 1006705 GGGACCA 1006711 >seq59 Length=1535309 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| ||||| |||||||| || |||| | || ||| Sbjct 1416569 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACACCAAGGTCGCGAGTTCAACCCTCGT 1416510 Query 136776 TGGGAACA 136783 ||||| || Sbjct 1416509 TGGGACCA 1416502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974490749000