Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq124 206 3e-48
seq99 89.7 6e-13
seq59 87.8 2e-12
>seq124
Length=198120
Score = 206 bits (228), Expect = 3e-48
Identities = 1099/1726 (64%), Gaps = 51/1726 (3%)
Strand=Plus/Plus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
||||||||| ||||| ||||||||| | |||||| ||||| ||||| | || |||
Sbjct 125168 GTTCATCGATTGAGATTGATCGATGTAAGCACCACGGTCAGCGGCCATCTGGACGATTGT 125227
Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619
||| || |||||||| |||||||| | | |||||| ||| | || ||||
Sbjct 125228 TCGTTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGGATGTTGGG 125287
Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679
||||| || ||||| |||||| | | ||| | | |||||| | | ||||| ||
Sbjct 125288 AATGTTCTGGATAGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCATAG 125347
Query 109680 ACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCA 109737
||| | | |||||| | | || ||| |||||| || ||||||||||||
Sbjct 125348 ACCCATATCGACGAGATCCTTCAGGAGCCATGG--GTTGACGACCTGGAATTCACCAGCA 125405
Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797
|| || || ||||||||| | ||||| || ||||| ||||| ||| ||| ||
Sbjct 125406 AGAACACGACGAGAGTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGA 125465
Query 109798 ATTTGTGCAGTGGAA---GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCC 109854
||||| | ||| | || || ||||||||||| | ||| | ||||| || | |||
Sbjct 125466 ATTTG---ACTGGTACTGGCAGTTGGCATGGGAGCAACGAGCAAGCTGTTGCGAACACCG 125522
Query 109855 TTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCA 109914
| | ||| | | ||| || | ||||| || | | | || ||| ||
Sbjct 125523 TGCTGCTTGATCTGCTGCTTCAAGGTATCCCAGTCCCAGAGGTCGGTA---GGAGTGACA 125579
Query 109915 CCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCG 109974
| ||||||| || ||||| |||||| | | || ||||| | | | |||||
Sbjct 125580 C---CCCACATGTCATACTGAAGCTCACCCTTGGAGACGGGTGAACCTTCGTATGTCTCG 125636
Query 109975 TACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTC 110034
|| | || | ||||| ||| | ||| ||||| || || || || || || |||
Sbjct 125637 TATGGTCCGTGAACCTTGGCAAGCTCAACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTC 125696
Query 110035 TCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAG 110093
|| || || || || | | | | ||| | ||||||| ||||| | | |
Sbjct 125697 TCGAAGATCTGGATGTTGAGGTGCTTGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCC 125756
Query 110094 AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA 110153
|| ||| |||| || ||||| || ||||||| | |||| || || || | ||| |
Sbjct 125757 AAGAAA-GCATCAGCAAGACCTTGGACACCGACAGCAATAGGTCGGTGACGGAAGTT-GC 125814
Query 110154 GCGTCGAGCAGTTTC---TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTT 110210
| || | | || || ||||| ||||| || |||| | || || |||||
Sbjct 125815 TCTTCTTG--GCCTCGGGGACAGGGTAGTAGTTGACATCAATGATCTTGTTCAGGTTCTT 125872
Query 110211 CGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTC-TCCTTAT 110269
||| || || ||| ||||| || | | ||| | | | | || | | |
Sbjct 125873 GACGACAACCTGGCAGACTTCGTGGAGCTTCGCAAAGTCGTA-GGTACCATCGTTGGTGT 125931
Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329
|||| || |||||||||||| || || | ||||| |||| ||| || |
Sbjct 125932 TGACGTAGGTGGGGAGAGCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCAC 125991
Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389
||| |||| ||| || || || | |||||| || ||| || | ||||||||| |
Sbjct 125992 AGTACTCCACAATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGT 126051
Query 110390 T-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448
| | ||| | ||||| |||||||| ||||||||| |||| | ||||| || ||||||
Sbjct 126052 TGCTCTTTCTA-TTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGT 126110
Query 110449 GACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTT 110506
| || | |||| | ||| | | || || | ||||| | | ||||
Sbjct 126111 GCCTCCAAGATGGAGTACCAAAGTTTCTGTGCCTTGATGGTCTTGCG--ACCCTTGCCTT 126168
Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566
| ||||||||| ||| | |||| || || | || || ||||||| | | |||
Sbjct 126169 CACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCATAGACATCAGCCA-AGCCT 126227
Query 110567 TCGC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625
|| || || ||| || | | | ||| | |||| || |||||| | |||||||||
Sbjct 126228 GGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAG 126287
Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGG 110685
|| ||||| ||||||| || |||| || ||||| || | || || | || |||
Sbjct 126288 AGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGG 126347
Query 110686 TTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCG 110745
|| || || || | | || | || ||| | ||||||||| ||||| |||| |||
Sbjct 126348 TTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCG 126407
Query 110746 A-------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798
| ||| || ||| | | || | |||| || || | || ||| |||||
Sbjct 126408 AAAGCACCTGG-TCTCTT--GTTG-CCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAA 126463
Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858
||| | ||||| |||| || || | ||| | || || || ||| ||| ||
Sbjct 126464 GACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACC 126523
Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT--TTGT 110916
| |||||||| ||| | || | ||| || ||||| || ||| || | |
Sbjct 126524 GGTAGCACGAATTCGGTGAACATTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGC 126583
Query 110917 GCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976
||| | ||| | | |||| | || ||||| ||||| ||| | || || | || ||
Sbjct 126584 GCA-AGTCT-TCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGG 126641
Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036
||||| ||||| | || | | || || || || ||| | || || | |||||
Sbjct 126642 AAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGG 126701
Query 111037 ATGAA-CAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACC 111095
|||| || | ||||||||| ||||||||| |||| || | | ||||| |||
Sbjct 126702 GTGAAGCACTTC-TGGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACC 126760
Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATC 111155
||||||||||| || |||||||| | ||||| ||| || ||| | |||||| ||
Sbjct 126761 GTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCTCGCAGATCTTTCCGTC 126820
Query 111156 AACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
| || | ||||| ||| || ||||||| || ||||||
Sbjct 126821 CAGGCGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCGAAGTAT 126866
>seq99
Length=1752785
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1006645 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1006704
Query 136777 GGGAACA 136783
|||| ||
Sbjct 1006705 GGGACCA 1006711
>seq59
Length=1535309
Score = 87.8 bits (96), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||||||||||||| ||||| |||||||| || |||| | || |||
Sbjct 1416569 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACACCAAGGTCGCGAGTTCAACCCTCGT 1416510
Query 136776 TGGGAACA 136783
||||| ||
Sbjct 1416509 TGGGACCA 1416502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974490749000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |