Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq183 107 2e-18 >seq183 Length=1107324 Score = 107 bits (118), Expect = 2e-18 Identities = 185/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 || |||||| | || | | ||| | ||||| | || | || | || || || || Sbjct 569088 GACATTGCTTTCGGAAATGCTCAACGATTTGGAGTACCATTTGGCTTCGGTGGACCACAC 569147 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 ||||| ||||||||| ||||| | || ||| ||||||| || || | | | || Sbjct 569148 GCTGCTTTCTTTGCAGTGACAGATCAATACAAGCGAAAGATTCCAGGACGTCTCATTGGA 569207 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 |||| ||| || ||| | || ||| ||||| || | ||||| ||||||||| Sbjct 569208 GTGTCAAAAGACAGATTAGGAGACAAGGCAATGAGATTGGCTTTGCAGACGAGAGAGCAG 569267 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 |||||| | ||||| || || || || ||| | ||||| || || ||| || |||| ||| Sbjct 569268 CATATCCGAAGAGAAAAGGCGACGAGCAACGTATGCACCGCGCAAGCATTGTTGGCAAAT 569327 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015 ||| || |||||||||| || ||||| Sbjct 569328 ATGAGTGCCTTCTATGCAGTCTACCATGG 569356 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 154938 GTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGA 154997 |||||| | |||| || || || ||| | || || || || | ||||||||| | || Sbjct 570354 GTTCATCAACATGGCGGACAAGTCTATATGGACGGTGCCAACATGAATGCACAGATTGGC 570413 Query 154998 CTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTC 155057 || |||| | ||| ||| || ||||| |||||| | ||||| || || || ||| Sbjct 570414 TTATGCTCACCAGGAGAGATTGGAGCCGATGTCTGTCATTTGAACTTGCACAAGACTTTC 570473 Query 155058 TGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||| ||||| || |||||||| || || ||||| || ||||| Sbjct 570474 TGTATTCCTCATGGTGGCGGAGGTCCAGGTGTTGGTCCAATTGGTGT 570520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211315767200