Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq183 107 2e-18
>seq183
Length=1107324
Score = 107 bits (118), Expect = 2e-18
Identities = 185/269 (69%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
|| |||||| | || | | ||| | ||||| | || | || | || || || ||
Sbjct 569088 GACATTGCTTTCGGAAATGCTCAACGATTTGGAGTACCATTTGGCTTCGGTGGACCACAC 569147
Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866
||||| ||||||||| ||||| | || ||| ||||||| || || | | | ||
Sbjct 569148 GCTGCTTTCTTTGCAGTGACAGATCAATACAAGCGAAAGATTCCAGGACGTCTCATTGGA 569207
Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926
|||| ||| || ||| | || ||| ||||| || | ||||| |||||||||
Sbjct 569208 GTGTCAAAAGACAGATTAGGAGACAAGGCAATGAGATTGGCTTTGCAGACGAGAGAGCAG 569267
Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|||||| | ||||| || || || || ||| | ||||| || || ||| || |||| |||
Sbjct 569268 CATATCCGAAGAGAAAAGGCGACGAGCAACGTATGCACCGCGCAAGCATTGTTGGCAAAT 569327
Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015
||| || |||||||||| || |||||
Sbjct 569328 ATGAGTGCCTTCTATGCAGTCTACCATGG 569356
Score = 98.7 bits (108), Expect = 1e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 154938 GTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGA 154997
|||||| | |||| || || || ||| | || || || || | ||||||||| | ||
Sbjct 570354 GTTCATCAACATGGCGGACAAGTCTATATGGACGGTGCCAACATGAATGCACAGATTGGC 570413
Query 154998 CTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTC 155057
|| |||| | ||| ||| || ||||| |||||| | ||||| || || || |||
Sbjct 570414 TTATGCTCACCAGGAGAGATTGGAGCCGATGTCTGTCATTTGAACTTGCACAAGACTTTC 570473
Query 155058 TGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||| ||||| || |||||||| || || ||||| || |||||
Sbjct 570474 TGTATTCCTCATGGTGGCGGAGGTCCAGGTGTTGGTCCAATTGGTGT 570520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211315767200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |