Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq183 125 8e-24 >seq183 Length=1107324 Score = 125 bits (138), Expect = 8e-24 Identities = 189/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 ||||||||| | || | | ||| | ||||| | || | || | ||| || || || Sbjct 569088 GACATTGCTTTCGGAAATGCTCAACGATTTGGAGTACCATTTGGCTTCGGTGGACCACAC 569147 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 ||||| ||||||||| ||||| | || ||| ||||||| || || | | | || Sbjct 569148 GCTGCTTTCTTTGCAGTGACAGATCAATACAAGCGAAAGATTCCAGGACGTCTCATTGGA 569207 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 |||| ||| || ||| | || ||| ||||| || | ||||| ||||||||| Sbjct 569208 GTGTCAAAAGACAGATTAGGAGACAAGGCAATGAGATTGGCTTTGCAGACGAGAGAGCAG 569267 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 |||||| ||||||| || || || || ||| | ||||| || |||||| || |||| ||| Sbjct 569268 CATATCCGAAGAGAAAAGGCGACGAGCAACGTATGCACCGCGCAAGCATTGTTGGCAAAT 569327 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGG 158690 ||| || |||||||||| || ||||| Sbjct 569328 ATGAGTGCCTTCTATGCAGTCTACCATGG 569356 Score = 111 bits (122), Expect = 2e-19 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 159611 TTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAG 159670 |||||||| | |||| || || || ||| | || ||||| || | ||||||||| | | Sbjct 570352 TTGTTCATCAACATGGCGGACAAGTCTATATGGACGGTGCCAACATGAATGCACAGATTG 570411 Query 159671 GTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACAT 159730 | || |||| | || ||| || ||||| |||||| | ||||| || ||||| | Sbjct 570412 GCTTATGCTCACCAGGAGAGATTGGAGCCGATGTCTGTCATTTGAACTTGCACAAGACTT 570471 Query 159731 TCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||||| ||||| || |||||||| || || ||||| |||||||| Sbjct 570472 TCTGTATTCCTCATGGTGGCGGAGGTCCAGGTGTTGGTCCAATTGGTGT 570520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049693118800