Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq183 125 8e-24
>seq183
Length=1107324
Score = 125 bits (138), Expect = 8e-24
Identities = 189/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481
||||||||| | || | | ||| | ||||| | || | || | ||| || || ||
Sbjct 569088 GACATTGCTTTCGGAAATGCTCAACGATTTGGAGTACCATTTGGCTTCGGTGGACCACAC 569147
Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541
||||| ||||||||| ||||| | || ||| ||||||| || || | | | ||
Sbjct 569148 GCTGCTTTCTTTGCAGTGACAGATCAATACAAGCGAAAGATTCCAGGACGTCTCATTGGA 569207
Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601
|||| ||| || ||| | || ||| ||||| || | ||||| |||||||||
Sbjct 569208 GTGTCAAAAGACAGATTAGGAGACAAGGCAATGAGATTGGCTTTGCAGACGAGAGAGCAG 569267
Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
|||||| ||||||| || || || || ||| | ||||| || |||||| || |||| |||
Sbjct 569268 CATATCCGAAGAGAAAAGGCGACGAGCAACGTATGCACCGCGCAAGCATTGTTGGCAAAT 569327
Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGG 158690
||| || |||||||||| || |||||
Sbjct 569328 ATGAGTGCCTTCTATGCAGTCTACCATGG 569356
Score = 111 bits (122), Expect = 2e-19
Identities = 126/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 159611 TTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAG 159670
|||||||| | |||| || || || ||| | || ||||| || | ||||||||| | |
Sbjct 570352 TTGTTCATCAACATGGCGGACAAGTCTATATGGACGGTGCCAACATGAATGCACAGATTG 570411
Query 159671 GTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACAT 159730
| || |||| | || ||| || ||||| |||||| | ||||| || ||||| |
Sbjct 570412 GCTTATGCTCACCAGGAGAGATTGGAGCCGATGTCTGTCATTTGAACTTGCACAAGACTT 570471
Query 159731 TCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||||||||| ||||| || |||||||| || || ||||| ||||||||
Sbjct 570472 TCTGTATTCCTCATGGTGGCGGAGGTCCAGGTGTTGGTCCAATTGGTGT 570520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588049693118800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |