Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq93 152 1e-31
seq99 109 1e-18
>seq93
Length=1762202
Score = 152 bits (168), Expect = 1e-31
Identities = 146/187 (78%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || |||||||| |||| || |||| |||||||||
Sbjct 806091 ACGAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCATCTTCG 806032
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || |||||||| || ||||||||||| ||||| |||||||| ||||| ||
Sbjct 806031 AGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 805972
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| || |||||||| || ||| || || ||||| | ||||||
Sbjct 805971 ATCTTCGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTCTTT 805912
Query 195112 CCTGTCA 195118
|| ||||
Sbjct 805911 CCAGTCA 805905
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || ||||||||||| || | || ||||| ||||| || | ||
Sbjct 806314 GTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCCTCCAATTG 806255
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||||||||| ||||| || || || || || || || || |||||||| ||
Sbjct 806254 CTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCTTGAATCTT 806195
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| || || ||||| || ||| || ||||| || | |||||||| ||
Sbjct 806194 CGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTCTTTCCGGT 806135
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | |||||
Sbjct 806134 CAAGGTCTTGACGAAGATCTGCAT 806111
Score = 127 bits (140), Expect = 5e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996
|| ||||| ||||| |||||||| ||||| ||| |||| || | ||||| || | ||
Sbjct 806541 TGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAG-GTACGACCATCCTCCAATTG 806483
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || ||||| | ||| || ||||| || ||||| || || || || ||||| ||
Sbjct 806482 CTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAATCTT 806423
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
| |||||| || ||||||||||| || |||||||| | || | ||||| || ||
Sbjct 806422 TGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCCAGT 806363
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|||||| || || || | |||||
Sbjct 806362 CAAAGTCTTGACAAAGATCTGCAT 806339
Score = 125 bits (138), Expect = 2e-23
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||||||||||| || ||||| ||||| | |||||| | || |||||
Sbjct 805808 ACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCTTCA 805749
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | ||||||||||| || |||||||| || ||||| |||
Sbjct 805748 AGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 805689
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| || ||| || || || ||||| ||
Sbjct 805688 ATCTTGCTCTTTACATTATCGATGGTATC 805660
>seq99
Length=1752785
Score = 109 bits (120), Expect = 1e-18
Identities = 134/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
||||| || ||||||||| || || | ||||| ||||| ||||| || ||||||||
Sbjct 456626 TTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATC 456567
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| ||||||||||| || || || ||||| ||||| || || || ||||||||| ||
Sbjct 456566 AGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 456507
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|| ||||| ||| ||||| || ||||| | ||||| || || | || || |||
Sbjct 456506 ATAGTGTCGCTCGA---CTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACG 456450
Query 195130 AA 195131
||
Sbjct 456449 AA 456448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109478685877235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |