Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq124 122 1e-22 >seq124 Length=198120 Score = 122 bits (134), Expect = 1e-22 Identities = 479/746 (64%), Gaps = 18/746 (2%) Strand=Plus/Plus Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053 || || || |||||||| ||||| || || | ||||| || |||| | || | ||| Sbjct 126063 TTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATG 126122 Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCT----TTATTATCATGTTCGTA 48109 || | ||||| || ||||| || | ||| || || ||| | ||||| Sbjct 126123 GAGTACCAAAGTTTCTGTGCCTTGAT----GGTCTTGCGACCCTTGCCTTCACGCTCGTA 126178 Query 48110 TTTA--GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCA 48167 || ||||| | | ||| || ||||| ||||| |||| | | || || || || || Sbjct 126179 CTTCTCGTATAGAGC--CTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCG 126236 Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 || || |||||||| | ||| || ||| || | || | |||| || | ||| || Sbjct 126237 TTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGG 126296 Query 48228 ATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA 48287 ||||| | || || | ||| | || || | ||| || ||||| ||| || Sbjct 126297 ATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGG 126356 Query 48288 AGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCT 48347 || ||||| | || | | ||| || |||||||| || | || || || | ||||| Sbjct 126357 AGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCT 126416 Query 48348 GGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATT 48407 |||| || || || ||||| || | ||||||||||| ||||| | || | || ||| Sbjct 126417 GGTCTCTTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATG 126476 Query 48408 GGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT- 48466 || || ||||| || || | || || ||||||| ||| || || |||| | || Sbjct 126477 GGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATT 126536 Query 48467 -ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAA 48525 | |||| | ||| || ||||| || | || || || | || || || | Sbjct 126537 CGGTGAACATTG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCA 126594 Query 48526 GGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACA 48585 ||||| || || || || || ||||| ||| |||| | | || || || ||| | Sbjct 126595 ATGTATCGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGA 126654 Query 48586 TTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCT 48645 ||| | || || || | ||||| ||||| || ||||| | || || |||| Sbjct 126655 GTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCT 126714 Query 48646 CTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATA 48704 || | ||| || ||||| || || ||| || ||||| || | || ||||| | | Sbjct 126715 GGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACA 126773 Query 48705 GATACACGCATTAACATATATTGAGG 48730 | || ||||| | ||||| ||| || Sbjct 126774 GCCACTCGCATAATCATATGTTGTGG 126799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107359596200