Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq93 123 2e-22
>seq93
Length=1762202
Score = 123 bits (136), Expect = 2e-22
Identities = 387/593 (65%), Gaps = 6/593 (1%)
Strand=Plus/Plus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
|| |||||||| ||| | ||||||||||| || || ||| | | | ||| | |
Sbjct 595941 GCGATAGGTATCGATCTCGGAACCACATACTCCTGCGTGGGTATCTTCAGAGATGACAGA 596000
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
| ||||| |||||||| || ||||| ||| ||||||| || || | || | |||||
Sbjct 596001 ATCGAAATCATTGCCAACGACCAAGGCAACCGAACTACCCCCTCCTTCGTCGCCTTCACC 596060
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| || || | | | | || ||||| ||||| | |||| | | || || ||
Sbjct 596061 GACACCGAGCGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCACAGAAC 596120
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCAGGC 550230
|| | || ||||| || ||||| || ||| | ||||| | ||| | || |||||
Sbjct 596121 ACAGTCTTCGATGCGAAGCGTTTGATCGGACGCAAGTTCGCA-GATGCTGAGGTCCAGGC 596179
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290
||||||||||| | || ||| | || || | |||||| || ||||| |
Sbjct 596180 TGATATGAAGCACTTCCCCTTCACCGTCATTGATCGTGGTGGAAAGCCAGTCATTGAGGT 596239
Query 550291 T-ACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348
| | | | |||| | | || ||||| |||| || |||| || || ||||| ||
Sbjct 596240 TGAGT--TCAAGGGTGAGAAGAAGCAATTCACACCTGAGGAAATCTCTTCAATGGTCTTG 596297
Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
| || ||| | || || || | ||||| | || | | || || |
Sbjct 596298 GTTAAGATGCGCGAGACTGCGGAGGCATACCTTGGTGGAACTGTCAACAACGCTGTCGTC 596357
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
|| || ||||| || || | || |||||||||||||| || || |||||||| |||
Sbjct 596358 ACAGTCCCAGCCTACTTCACCGATTCACAACGTCAAGCCACCAAGGATGCTGGTTTAATT 596417
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || || || ||||| || || ||||| ||||| ||||| || || | ||||| ||
Sbjct 596418 GCCGGTCTCAACGTTCTCCGAATCATCAACGAACCCACTGCGGCCGCTATCGCATACGGT 596477
Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581
|| ||||| | ||| || | ||| || |||||||| ||| ||| ||
Sbjct 596478 CTCGATAAGAAGGTTGAGGGTGAGCGTAACGTTCTCATCTTCGATCTTGGTGG 596530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029285158675450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |