Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq93 123 2e-22 >seq93 Length=1762202 Score = 123 bits (136), Expect = 2e-22 Identities = 387/593 (65%), Gaps = 6/593 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || |||||||| ||| | ||||||||||| || || ||| | | | ||| | | Sbjct 595941 GCGATAGGTATCGATCTCGGAACCACATACTCCTGCGTGGGTATCTTCAGAGATGACAGA 596000 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 | ||||| |||||||| || ||||| ||| ||||||| || || | || | ||||| Sbjct 596001 ATCGAAATCATTGCCAACGACCAAGGCAACCGAACTACCCCCTCCTTCGTCGCCTTCACC 596060 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | | || ||||| ||||| | |||| | | || || || Sbjct 596061 GACACCGAGCGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCACAGAAC 596120 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCAGGC 550230 || | || ||||| || ||||| || ||| | ||||| | ||| | || ||||| Sbjct 596121 ACAGTCTTCGATGCGAAGCGTTTGATCGGACGCAAGTTCGCA-GATGCTGAGGTCCAGGC 596179 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||||||||||| | || ||| | || || | |||||| || ||||| | Sbjct 596180 TGATATGAAGCACTTCCCCTTCACCGTCATTGATCGTGGTGGAAAGCCAGTCATTGAGGT 596239 Query 550291 T-ACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | | | | |||| | | || ||||| |||| || |||| || || ||||| || Sbjct 596240 TGAGT--TCAAGGGTGAGAAGAAGCAATTCACACCTGAGGAAATCTCTTCAATGGTCTTG 596297 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || ||| | || || || | ||||| | || | | || || | Sbjct 596298 GTTAAGATGCGCGAGACTGCGGAGGCATACCTTGGTGGAACTGTCAACAACGCTGTCGTC 596357 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| || || | || |||||||||||||| || || |||||||| ||| Sbjct 596358 ACAGTCCCAGCCTACTTCACCGATTCACAACGTCAAGCCACCAAGGATGCTGGTTTAATT 596417 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || || ||||| || || ||||| ||||| ||||| || || | ||||| || Sbjct 596418 GCCGGTCTCAACGTTCTCCGAATCATCAACGAACCCACTGCGGCCGCTATCGCATACGGT 596477 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 || ||||| | ||| || | ||| || |||||||| ||| ||| || Sbjct 596478 CTCGATAAGAAGGTTGAGGGTGAGCGTAACGTTCTCATCTTCGATCTTGGTGG 596530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029285158675450