Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq93 136 3e-27
>seq93
Length=1762202
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| || || || || ||||| || ||||| ||| | || | |||| |||
Sbjct 806547 ACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCCTCC 806488
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
||||||||||| ||||| ||||| ||||| || || || ||||| || || ||||| |||
Sbjct 806487 AATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGA 806428
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| ||| || ||| | || | ||||| |||| |||||||| | |||| || |||
Sbjct 806427 ATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTG 806368
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || ||||| || ||||| |||||||||
Sbjct 806367 CCAGTCAAAGTCTTGACAAAGATCTGCATG 806338
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || ||||| || || || || |||||||| || | | |||||| |||| |||
Sbjct 806319 ACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCCTCC 806260
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
||||||||||| || || || | ||| || |||||||| || || || || |||||||||
Sbjct 806259 AATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCTTGA 806200
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| || | ||| || |||||||||| || ||
Sbjct 806199 ATCTTCGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTCTTT 806140
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || || || || ||||||||
Sbjct 806139 CCGGTCAAGGTCTTGACGAAGATCTGCAT 806111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396277409923185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |