Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq124 174 3e-38
seq93 158 2e-33
>seq124
Length=198120
Score = 174 bits (192), Expect = 3e-38
Identities = 1032/1634 (63%), Gaps = 70/1634 (4%)
Strand=Plus/Plus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| | | ||||||| |||| || || || |||||||| |||||
Sbjct 125040 ACAGTGAACTGAATAGGAGCTGAAGCAGCCATGGTACGGAGGTAATACATGCCAGTCTTC 125099
Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTG 212671
| |||| |||||| | |||||| |||| ||| |||| | ||| ||
Sbjct 125100 AAGCCCAACTTCCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCC-----ATTGTG 125150
Query 212672 GTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCT 212731
| ||| | || ||| | ||||| || ||| || || ||| | | | |
Sbjct 125151 GG-ATCTTT------CATATGGATGTTCATCGATTGAGATTGATCGATGTAAGCACCACG 125203
Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791
|||||||||||| | | ||| || || |||| |||||| ||||||||| ||| |
Sbjct 125204 GTCAGCGGCCATCTGGACGATTGTTCGTTGAGAGATCTCCCAGACGGTCTTGTAGAGAGC 125263
Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTG 212851
|||| ||| |||||| | ||| |||||||| | ||| || | || | | | ||
Sbjct 125264 CTTGATGTCAGCTGGGATGTTGGGAATGTTCTGGATAGAACCACC----ATCGGC-GATG 125318
Query 212852 CAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| ||| ||||| || ||| || ||| | | || ||| | ||
Sbjct 125319 -ATGCGGTTCTTCATGTTGTCAGACCATAGACCCATATCGACGAGATCCTTCAGGAGCCA 125377
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| ||||| | || || | | ||| | ||| || |||||
Sbjct 125378 TGGGTTGACGACCTGGAATTCACCAGCAAGAACACGACGAGAGTAGATGTTGGATGTGTA 125437
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
||||||| || ||||||| || ||||| || || ||||| || |||||||||||
Sbjct 125438 TGGCTCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACTGGCAGTTGGCATGGGAGC 125497
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCG-AAGCTCTGCCCAGT 213084
|| || | ||||| | || ||||||| ||| | || ||| | | ||||||
Sbjct 125498 AACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGTAT-CCCAGT 125556
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG-CCT 213143
|||| | | | ||| | || |||||||||| |||| ||| | ||
Sbjct 125557 CCCAGAGGTCGGT-AGGAG--------TGACACCCCACATGTCATACTG-AAGCTCACCC 125606
Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203
||| ||||| || | ||| | ||| || || || ||||||| |||||
Sbjct 125607 TTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCTCAACT 125666
Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263
|| | || || |||| ||| ||||| || || |||| ||||||| | |||||||
Sbjct 125667 GAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCTTGGCC 125726
Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323
|| || || ||| || | | ||| ||||||| || || ||||| |||
Sbjct 125727 TCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTGGACACCG 125786
Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383
| | || |||| ||| | | ||| ||| | ||| | ||||| |||||
Sbjct 125787 ACAGCAATAGGTCGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTAGTAGTTG 125846
Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443
|| ||||||||||| ||||| | | | || | | ||| | | || | | |
Sbjct 125847 ACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGGAGCTTCGCA 125906
Query 213444 TGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCC 213497
|| ||||| || || | || | || || || | | |||
Sbjct 125907 ------AAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAAGCC 125960
Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557
| ||||||||| || ||||| | || | |||||||| ||||| ||||| ||||||
Sbjct 125961 AAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGGTTG 126020
Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAG 213617
|| ||| || ||||| ||||||| ||||| |||| ||| || ||||||||||
Sbjct 126021 GAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAG 126080
Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677
|||||| | || ||| ||||| ||| | | ||| || | ||| || | |
Sbjct 126081 AGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTTTCTGT 126140
Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736
||||||| | || | | | | | | | |||||||| ||||| || | |
Sbjct 126141 GCCTTGATG----GTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTC 126196
Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCA 213796
||| || | || |||| ||| || || || ||| ||||| | ||||
Sbjct 126197 GAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCA 126256
Query 213797 GTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855
|| || | | |||| || | || |||||| || || |||| ||||| ||| ||| |
Sbjct 126257 CTCTCCATTCTTCTCA-ACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGA 126315
Query 213856 GGTCCCTGG-TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914
| || | | || || || || || ||| || || ||||| || | || |||
Sbjct 126316 GATCACGAGCTCGGACT-TCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAG 126374
Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971
| || |||||||| ||||| | ||||||||| || || || || |||||| || ||
Sbjct 126375 ACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCT 126434
Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGAC 214031
||||| || ||||| ||||||||| || || | ||| || | ||||||||
Sbjct 126435 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAG 126494
Query 214032 TGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCC 214089
| |||||| |||||||| || || | |||| || | | | || ||| |||| |
Sbjct 126495 TTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGA--C 126552
Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149
| || ||||| || | |||||||||||||||||| | ||| || || ||| |||
Sbjct 126553 CGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGT 126612
Query 214150 CCATGCTGTCATCT 214163
| ||||| || |||
Sbjct 126613 CAATGCTATCCTCT 126626
>seq93
Length=1762202
Score = 158 bits (174), Expect = 2e-33
Identities = 353/524 (67%), Gaps = 27/524 (5%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| || || | ||||| |||||||| ||||| || | | ||||||||||||
Sbjct 1532402 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCC 1532343
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGT-GTCAGGCCCATCTGTTCCA 47954
|||||| ||| ||||||| || || || ||| ||| | || | || | |
Sbjct 1532342 ATGAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACA-----A 1532288
Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014
| || |||| || ||| |||||||||||| ||||||| || ||||||||| | ||
Sbjct 1532287 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGA 1532228
Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| | || | ||||| || | ||||||| ||| |||| || || || | |
Sbjct 1532227 GTGCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168
Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTG-TTGCGCAGGTGCTTGGCAT------AGAGC 48127
| ||| |||| | | ||| ||| || ||||||| || ||||
Sbjct 1532167 CGT-CTT------GGACG--GCTTGCTTGCTTGGGC-GGTGCTTCAAATGAGAGAAGAGA 1532118
Query 48128 ATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAG 48187
| ||| |||||||| |||| | || ||||| || ||| || |||| |||||
Sbjct 1532117 AGGCAAGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTC 1532058
Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247
||||||| ||||| || | || || | |||||| || | ||||| || ||| ||||
Sbjct 1532057 AGACCAGCCATGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAG 1531998
Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307
||||| ||||| || || ||||| ||| ||| | | | || | || | ||||||||
Sbjct 1531997 AAGATACCCTCGACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGCTCTTGTCT 1531938
Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|||||| | |||||||| ||||||||||||||||| ||
Sbjct 1531937 TGGATCCATCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1531894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530412947200
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