Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq124 174 3e-38 seq93 158 2e-33 >seq124 Length=198120 Score = 174 bits (192), Expect = 3e-38 Identities = 1032/1634 (63%), Gaps = 70/1634 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| | | ||||||| |||| || || || |||||||| ||||| Sbjct 125040 ACAGTGAACTGAATAGGAGCTGAAGCAGCCATGGTACGGAGGTAATACATGCCAGTCTTC 125099 Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTG 212671 | |||| |||||| | |||||| |||| ||| |||| | ||| || Sbjct 125100 AAGCCCAACTTCCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCC-----ATTGTG 125150 Query 212672 GTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCT 212731 | ||| | || ||| | ||||| || ||| || || ||| | | | | Sbjct 125151 GG-ATCTTT------CATATGGATGTTCATCGATTGAGATTGATCGATGTAAGCACCACG 125203 Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 |||||||||||| | | ||| || || |||| |||||| ||||||||| ||| | Sbjct 125204 GTCAGCGGCCATCTGGACGATTGTTCGTTGAGAGATCTCCCAGACGGTCTTGTAGAGAGC 125263 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTG 212851 |||| ||| |||||| | ||| |||||||| | ||| || | || | | | || Sbjct 125264 CTTGATGTCAGCTGGGATGTTGGGAATGTTCTGGATAGAACCACC----ATCGGC-GATG 125318 Query 212852 CAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | ||| ||||| || ||| || ||| | | || ||| | || Sbjct 125319 -ATGCGGTTCTTCATGTTGTCAGACCATAGACCCATATCGACGAGATCCTTCAGGAGCCA 125377 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| ||||| | || || | | ||| | ||| || ||||| Sbjct 125378 TGGGTTGACGACCTGGAATTCACCAGCAAGAACACGACGAGAGTAGATGTTGGATGTGTA 125437 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || ||||||| || ||||| || || ||||| || ||||||||||| Sbjct 125438 TGGCTCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACTGGCAGTTGGCATGGGAGC 125497 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCG-AAGCTCTGCCCAGT 213084 || || | ||||| | || ||||||| ||| | || ||| | | |||||| Sbjct 125498 AACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGTAT-CCCAGT 125556 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG-CCT 213143 |||| | | | ||| | || |||||||||| |||| ||| | || Sbjct 125557 CCCAGAGGTCGGT-AGGAG--------TGACACCCCACATGTCATACTG-AAGCTCACCC 125606 Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 ||| ||||| || | ||| | ||| || || || ||||||| ||||| Sbjct 125607 TTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCTCAACT 125666 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 || | || || |||| ||| ||||| || || |||| ||||||| | ||||||| Sbjct 125667 GAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCTTGGCC 125726 Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 || || || ||| || | | ||| ||||||| || || ||||| ||| Sbjct 125727 TCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTGGACACCG 125786 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 | | || |||| ||| | | ||| ||| | ||| | ||||| ||||| Sbjct 125787 ACAGCAATAGGTCGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTAGTAGTTG 125846 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| ||||| | | | || | | ||| | | || | | | Sbjct 125847 ACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGGAGCTTCGCA 125906 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCC 213497 || ||||| || || | || | || || || | | ||| Sbjct 125907 ------AAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAAGCC 125960 Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 | ||||||||| || ||||| | || | |||||||| ||||| ||||| |||||| Sbjct 125961 AAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGGTTG 126020 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAG 213617 || ||| || ||||| ||||||| ||||| |||| ||| || |||||||||| Sbjct 126021 GAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAG 126080 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677 |||||| | || ||| ||||| ||| | | ||| || | ||| || | | Sbjct 126081 AGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTTTCTGT 126140 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736 ||||||| | || | | | | | | | |||||||| ||||| || | | Sbjct 126141 GCCTTGATG----GTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTC 126196 Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCA 213796 ||| || | || |||| ||| || || || ||| ||||| | |||| Sbjct 126197 GAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCA 126256 Query 213797 GTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 || || | | |||| || | || |||||| || || |||| ||||| ||| ||| | Sbjct 126257 CTCTCCATTCTTCTCA-ACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGA 126315 Query 213856 GGTCCCTGG-TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 | || | | || || || || || ||| || || ||||| || | || ||| Sbjct 126316 GATCACGAGCTCGGACT-TCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAG 126374 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971 | || |||||||| ||||| | ||||||||| || || || || |||||| || || Sbjct 126375 ACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCT 126434 Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGAC 214031 ||||| || ||||| ||||||||| || || | ||| || | |||||||| Sbjct 126435 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAG 126494 Query 214032 TGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCC 214089 | |||||| |||||||| || || | |||| || | | | || ||| |||| | Sbjct 126495 TTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGA--C 126552 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | || ||||| || | |||||||||||||||||| | ||| || || ||| ||| Sbjct 126553 CGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGT 126612 Query 214150 CCATGCTGTCATCT 214163 | ||||| || ||| Sbjct 126613 CAATGCTATCCTCT 126626 >seq93 Length=1762202 Score = 158 bits (174), Expect = 2e-33 Identities = 353/524 (67%), Gaps = 27/524 (5%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 1532402 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCC 1532343 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGT-GTCAGGCCCATCTGTTCCA 47954 |||||| ||| ||||||| || || || ||| ||| | || | || | | Sbjct 1532342 ATGAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACA-----A 1532288 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 | || |||| || ||| |||||||||||| ||||||| || ||||||||| | || Sbjct 1532287 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGA 1532228 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | | || | ||||| || | ||||||| ||| |||| || || || | | Sbjct 1532227 GTGCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168 Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTG-TTGCGCAGGTGCTTGGCAT------AGAGC 48127 | ||| |||| | | ||| ||| || ||||||| || |||| Sbjct 1532167 CGT-CTT------GGACG--GCTTGCTTGCTTGGGC-GGTGCTTCAAATGAGAGAAGAGA 1532118 Query 48128 ATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAG 48187 | ||| |||||||| |||| | || ||||| || ||| || |||| ||||| Sbjct 1532117 AGGCAAGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTC 1532058 Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 ||||||| ||||| || | || || | |||||| || | ||||| || ||| |||| Sbjct 1532057 AGACCAGCCATGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAG 1531998 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 ||||| ||||| || || ||||| ||| ||| | | | || | || | |||||||| Sbjct 1531997 AAGATACCCTCGACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGCTCTTGTCT 1531938 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||||| | |||||||| ||||||||||||||||| || Sbjct 1531937 TGGATCCATCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1531894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530412947200