Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq124 152 1e-31
seq93 131 3e-25
>seq124
Length=198120
Score = 152 bits (168), Expect = 1e-31
Identities = 400/604 (66%), Gaps = 25/604 (4%)
Strand=Plus/Plus
Query 221759 ATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGA 221818
||||| || ||||||||| || || || || |||| || || || ||| | |
Sbjct 126003 ATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTA 126062
Query 221819 TTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878
||| ||| |||||||||||||| || ||| |||||||| ||| ||| ||| ||
Sbjct 126063 TTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATG 126122
Query 221879 TTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTT 221931
|| ||| |||| |||| || | | ||| | |||| || ||| |||| |||
Sbjct 126123 GAGTACCAAAGTT-TCTGTGCCTTGATGGTCTTGCGACCCTTGCCTTCACGCTCGTACTT 126181
Query 221932 TTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACA 221991
|| ||||||||| | | |||| ||||| || | || ||| |||||| ||
Sbjct 126182 CTC-------GTATAGAGCCT--CGAACTCATCACCATAGACATCAGCCAAGCCTGGGCA 126232
Query 221992 CCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTC 222051
| | ||| ||||||| | |||| | || | | || | || ||||||||| ||
Sbjct 126233 CTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATC 126292
Query 222052 CGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTT 222111
|||||||||| || | |||||||| | | || ||||| ||||| ||| ||
Sbjct 126293 AGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTT 126352
Query 222112 CCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGC 222171
| ||||| | |||| || | || |||||||| ||||| || |||| ||| | |||
Sbjct 126353 TCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGC 126412
Query 222172 GCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAA 222230
|| |||| |||||||||||| || || || || ||| | |||||||| || |
Sbjct 126413 ACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATCT-GGCAGTGTTGTTGAAGACACGTA 126471
Query 222231 GGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC 222290
| | || || | |||||||| ||||| || ||| |||||| |||||| || |
Sbjct 126472 GCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCAC 126531
Query 222291 ---TCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGC 222347
| ||| | || | ||||| ||||| || | || ||||||||||||||
Sbjct 126532 GAATTCGGTGA---ACATTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAG 126588
Query 222348 TCTT 222351
||||
Sbjct 126589 TCTT 126592
>seq93
Length=1762202
Score = 131 bits (144), Expect = 3e-25
Identities = 338/513 (66%), Gaps = 11/513 (2%)
Strand=Plus/Plus
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873
||||||||| |||||| ||||| | | |||||| | | ||||| |||| ||||
Sbjct 1531898 GCATCAAGAAGAAGGCCGACTGGGCTGTCAGATGGATCCAAGACAAGAGCTCTACCTTTG 1531957
Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933
| || || || || || || ||||| ||||| ||||| ||||| || ||||| ||
Sbjct 1531958 CTCAACGTCTCGTCGCATTCGCCGCTGTCGAGGGTATCTTCTTCAGTGGATCGTTCGCAT 1532017
Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTC 25992
| ||||||||| | ||| || || |||| | || ||| ||||| || ||||| ||
Sbjct 1532018 CTATCTTCTGGTTAAAGAAGCGTGGTCTCATGGCTGGTCTG-ACTTTCTCTAACGAACTT 1532076
Query 25993 ATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTG 26052
||| | ||||||||||| |||| || ||||| ||||| |||| | | || |||
Sbjct 1532077 ATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCTTGCCTTCTCTTCTC---TCATTTG 1532133
Query 26053 CTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111
||| || |||| | ||||| | |||| | |||||||| ||||| ||
Sbjct 1532134 AAGCAC-CGCCCAAGCAAGCAAGCCGTCCAAGACGTCATTACCGAGGCTGTTGAGATTGA 1532192
Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171
| ||||||| | ||||||||| || |||||
Sbjct 1532193 GCAGGAGTTCTTGACCGAGGCTCTTCCTTGCGCACTCCTCGGCATGAACTCCAACCTCAT 1532252
Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGAC 26230
|| |||||||| |||| || || || | ||| | ||| | || || || |
Sbjct 1532253 GAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTTGTTGC-TCTTGGCAACGAGAAGG 1532311
Query 26231 TCTAC-AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACC 26289
||||| ||| ||| ||||| |||||||| ||||| ||||| || | | || ||||||
Sbjct 1532312 TCTACAAGTCAGCC-AACCCATTCGACTTCATGGAGAACATCTCACTTGCCGGAAAGACC 1532370
Query 26290 AACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
|||||||| || ||| | || || ||||| |||
Sbjct 1532371 AACTTCTTCGAGAAGCGTGTTGGTGACTACCAA 1532403
Score = 93.3 bits (102), Expect = 8e-14
Identities = 164/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || ||||||||| |||||||||||||||
Sbjct 1531509 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAAGAGATTGATCTG 1531568
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATC-CAAAGACGAGCAGCATT--TTC-TCAA 25592
| ||||| | ||| |||| || | | | ||| ||||| ||| || ||| ||
Sbjct 1531569 TCGAAGGATCTCCACGACTGGAAC-AACAAGCTCAATGACGATGAGCGTTACTTCATCTC 1531627
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|||| | |||||||| || || || ||||| || || |||||||| || |||| |
Sbjct 1531628 ACACGTTCTTGCATTCTTCGCCGCTTCAGATGGAATCGTCAACGAGAACCTTGTCGAGCG 1531687
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|| | | ||||| ||| | ||||| || |||||||| ||||||||
Sbjct 1531688 CTTTAGTGGTGAAGTTCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGAT 1531741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842419835200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |