Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq124 131 9e-26
>seq124
Length=198120
Score = 131 bits (144), Expect = 9e-26
Identities = 301/451 (67%), Gaps = 2/451 (0%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| || |||| | |||||| || ||| || | ||| || ||||||| || || ||
Sbjct 126254 CCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAA 126313
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| ||| | |||| | ||| ||||| ||||| |||||| ||||| | | | || ||
Sbjct 126314 GAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAA 126373
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
| ||||| ||||||||| || | ||||| || ||| |||| ||| || |||||
Sbjct 126374 GACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACC 126433
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
||| || |||||||| ||||| | ||||| || | ||| ||||| | || | ||
Sbjct 126434 TTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGA 126493
Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205
|||||| || | ||| | || || || | | ||| |||| ||| | |||
Sbjct 126494 GTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACC 126553
Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACAA-TCTGAAACTGTATCGAAAATTCCTT 26264
|||||||||||| || || || || ||| ||| || ||||||| | || || |
Sbjct 126554 GATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAA-TGTATCGTAGATACCGT 126612
Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTC 26324
|||||||| ||||||| | | | || || ||||| | ||| | || | ||| |
Sbjct 126613 CAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTAC 126672
Query 26325 CTGAATTAAATAATGTCGGTGTAGCATGAGT 26355
| | ||||| || || | |||||| ||
Sbjct 126673 CGGCGGCGAATAAAGTTGGGGAAGCATGGGT 126703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039367795375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |