Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq183 104 3e-17
>seq183
Length=1107324
Score = 104 bits (114), Expect = 3e-17
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||| ||||| || || |||||||| || ||||| ||||||||||| ||||| ||
Sbjct 570520 ACACCAATTGGACCAACACCTGGACCTCCGCCACCATGAGGAATACAGAAAGTCTTGTGC 570461
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|| || | |||||| ||||| || ||| || | |||| || || | |||||||
Sbjct 570460 AAGTTCAAATGACAGACATCGGCTCCAATCTCTCCTGGTGAGCATAAGCCAATCTGTGCA 570401
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAAC 138349
|| | || ||||| || | ||| || || || |||| | ||||||
Sbjct 570400 TTCATGTTGGCACCGTCCATATAGACTTGTCCGCCATGTTGATGAAC 570354
Score = 102 bits (112), Expect = 9e-17
Identities = 184/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
||||| || |||||||||| || ||||||||| | || |||||| || ||||| | |
Sbjct 569356 CCATGGTAGACTGCATAGAAGGCACTCATATTTGCCAACAATGCTTGCGCGGTGCATACG 569297
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391
|| || || || || ||||||| |||||||||||||| || || | || ||||| |
Sbjct 569296 TTGCTCGTCGCCTTTTCTCTTCGGATATGCTGCTCTCTCGTCTGCAAAGCCAATCTCATT 569237
Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451
|| | ||| ||||| |||| || | | | || || ||||||| |||
Sbjct 569236 GCCTTGTCTCCTAATCTGTCTTTTGACACTCCAATGAGACGTCCTGGAATCTTTCGCTTG 569177
Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511
|| | ||||| ||||||||| ||||| || || || ||| | || | || | |||
Sbjct 569176 TATTGATCTGTCACTGCAAAGAAAGCAGCGTGTGGTCCACCGAAGCCAAATGGTACTCCA 569117
Query 139512 AACCTTTGCATACTACCTACAGCAATATC 139540
|| | ||| | | || | |||||| ||
Sbjct 569116 AATCGTTGAGCATTTCCGAAAGCAATGTC 569088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578996916316600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |