Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq183 104 3e-17 >seq183 Length=1107324 Score = 104 bits (114), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||| ||||| || || |||||||| || ||||| ||||||||||| ||||| || Sbjct 570520 ACACCAATTGGACCAACACCTGGACCTCCGCCACCATGAGGAATACAGAAAGTCTTGTGC 570461 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || | |||||| ||||| || ||| || | |||| || || | ||||||| Sbjct 570460 AAGTTCAAATGACAGACATCGGCTCCAATCTCTCCTGGTGAGCATAAGCCAATCTGTGCA 570401 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAAC 138349 || | || ||||| || | ||| || || || |||| | |||||| Sbjct 570400 TTCATGTTGGCACCGTCCATATAGACTTGTCCGCCATGTTGATGAAC 570354 Score = 102 bits (112), Expect = 9e-17 Identities = 184/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || |||||||||| || ||||||||| | || |||||| || ||||| | | Sbjct 569356 CCATGGTAGACTGCATAGAAGGCACTCATATTTGCCAACAATGCTTGCGCGGTGCATACG 569297 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || || || || || ||||||| |||||||||||||| || || | || ||||| | Sbjct 569296 TTGCTCGTCGCCTTTTCTCTTCGGATATGCTGCTCTCTCGTCTGCAAAGCCAATCTCATT 569237 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || | ||| ||||| |||| || | | | || || ||||||| ||| Sbjct 569236 GCCTTGTCTCCTAATCTGTCTTTTGACACTCCAATGAGACGTCCTGGAATCTTTCGCTTG 569177 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 || | ||||| ||||||||| ||||| || || || ||| | || | || | ||| Sbjct 569176 TATTGATCTGTCACTGCAAAGAAAGCAGCGTGTGGTCCACCGAAGCCAAATGGTACTCCA 569117 Query 139512 AACCTTTGCATACTACCTACAGCAATATC 139540 || | ||| | | || | |||||| || Sbjct 569116 AATCGTTGAGCATTTCCGAAAGCAATGTC 569088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996916316600