Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq124 192 7e-44
seq93 102 1e-16
seq160 93.3 5e-14
>seq124
Length=198120
Score = 192 bits (212), Expect = 7e-44
Identities = 1077/1693 (64%), Gaps = 57/1693 (3%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
|||||| | ||| | ||||| || || | || || ||||| ||||| ||||| |||
Sbjct 126800 CCCACAACATATGATTATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAGGCTGC 126741
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCT 75329
| | ||||||||| || ||||||||| | || |||| || || | ||||| | |
Sbjct 126740 CATCGAGACATACAACTTGATGTCCCA-GAAGTGCTTCACCCATGCTTCCCCAACTTTAT 126682
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|| || ||||||||| | | || | || ||||||||||||| || || ||||
Sbjct 126681 TCGCCGCCGGTACACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGG 126622
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGC 75447
| || |||||||||| | || | | | | | ||||| | ||||| ||| ||
Sbjct 126621 ATAGCATTGACGGTATCTACGATACATTGAAG-ACT-TGCGCCATGATCTCCAAGAATGC 126564
Query 75448 TGGGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 75503
||| || || || ||| || | | ||| | || | | ||| ||
Sbjct 126563 TGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCTA-CCGGTGCCTAC---ATTGCGG 126508
Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563
| || || || | || | ||||| |||| ||||| || || || ||| ||| ||
Sbjct 126507 GAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCA 126448
Query 75564 GCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTGGAACCA 75619
| || || | |||| | ||| | || ||| | | ||| ||||| | || |||
Sbjct 126447 GATACGTCGACCAAG-GTGGCAACAAGAGACCAGGTGCTTTCGCCATCTACCTCGAGCCA 126389
Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679
||||| || ||| || | |||| |||||| | ||| ||||| || | || || |
Sbjct 126388 TGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTC 126329
Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| | | |||||||| | || ||||||| || || || ||||||||||| ||||||
Sbjct 126328 CGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAG 126269
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
|| ||| | ||| || | | || || || || ||||| | | || |
Sbjct 126268 AAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTAT 126209
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTA------TGAAGAGGAGGGTAGAGCCAAT 75853
||||| ||||| || || || ||| ||||| ||||| ||||| | |||
Sbjct 126208 GGTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCG---CAA- 126153
Query 75854 GCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912
||| | | || | | || ||||| | | || | | ||||||| ||||||||
Sbjct 126152 --GACCAT-CAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGG 126096
Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972
| |||| ||||| |||||||||||||| || | ||||| ||||| ||||| | ||
Sbjct 126095 GAATCCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGG 126036
Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032
||||| ||||| || || ||||| || ||| | |||||| | | ||||||
Sbjct 126035 CACAATTCGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGT 125976
Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCAC 76092
||||||||||| ||||| || | || || || | || ||||| | | | ||
Sbjct 125975 CGCTGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGTCAACACCAACGATGGTAC 125916
Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152
| || | || || || || ||| || || |||| ||| || || ||| |
Sbjct 125915 CTACGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAGAACCTGAACAAGAT 125856
Query 76153 CATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209
|||||| || | || || || ||| || ||| || | || ||| |
Sbjct 125855 CATTGATGTCAACTACTACCCTGTCCCCGAG---GCCAAGAAGAGCAACTTCCGTCACCG 125799
Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGT-GCCGCTACGCAT 76268
|||||||| | | ||||| |||||||| || |||| ||| || | |||| |||
Sbjct 125798 ACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATG-CTTTCTTGGCTCTCCGCCTTCCAT 125740
Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328
| || || ||| |||||| | | || | ||||| || ||||| || |||||
Sbjct 125739 TCGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCG 125680
Query 76329 CCCTGGAGGC--GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386
| || | ||| ||| | || | | || || | || ||||||| || ||
Sbjct 125679 CTCTCACTTCTTCAGT--TGAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGG 125622
Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCA 76445
||| |||| ||| | || | |||||||| ||| ||||||| || | || | | |
Sbjct 125621 TTCACCCGTCTCCAAGGGTGAGCTTCAGTATGACATGTGGG-GTGTCACTCCTACCGACC 125563
Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505
|| ||||||||| | ||| | | |||||| || | ||| |||| ||||| |
Sbjct 125562 TCTGGGACTGGGATACCTTGAAGCAGCAGATCAAGCAGCACGGTGTTCGCAACAGCTTGC 125503
Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565
| | || || |||||||| ||| ||| ||||| | || || || ||||| |
Sbjct 125502 TCGTTGCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCG 125443
Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625
| ||||||||| | ||||||||| | | || || ||||| || | ||||
Sbjct 125442 AGCCATACACATCCAACATCTACTCTCGTCGTGTTCTTGCTGGTGAATTCCAGGTCGTCA 125383
Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685
|| ||| | || || ||| | || ||||| ||||| | | |||||| | |
Sbjct 125382 ACCCATGGCTCCTGAAGGATCTCGTCGATATGGGTCTATGGTCTGACAACATGAAGAACC 125323
Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745
||| | | |||||||| || || || || | | ||||||| ||| ||||||
Sbjct 125322 GCATCATCGCCGATGGTGGTTCTATCCAGAACATTCCCAACATCCCAGCTGACATCAAGG 125263
Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGA--TGTCATTGACATGGCCGCAGA 76803
||||||| || || ||||| ||| | || || || | | |||||||| ||
Sbjct 125262 CTCTCTACAAGACCGTCTGGGAGATC--TCTCAACGAACAATCGTCCAGATGGCCGCTGA 125205
Query 76804 TCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGTCCAAC 76860
|||||| |||| ||| |||||| |||| |||| ||| || ||| || ||| ||
Sbjct 125204 CCGTGGT-GCTTACATCGATCAATCTCAATCGATGAACATCCAT--ATGAAAGATCCCAC 125148
Query 76861 GATGTCCAAGCTC 76873
||| |||| ||
Sbjct 125147 AATGGGCAAGATC 125135
>seq93
Length=1762202
Score = 102 bits (112), Expect = 1e-16
Identities = 277/423 (65%), Gaps = 12/423 (3%)
Strand=Plus/Plus
Query 65100 TGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGG 65159
||| ||||||||||||||| || || ||| |||| | ||||| |||||||| ||
Sbjct 1531983 TGTCGAGGGTATCTTCTTCAGTGGATCGTTCGCATCTATCTTCTGGTTAAAGAAGCGTGG 1532042
Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCA 65219
||||||| | || || ||||| || |||||||| || || || |||||||| |||
Sbjct 1532043 TCTCATGGCTGGTCTGACTTTCTCTAACGAACTTATCTCTCGTGACGAGGGTCTTCACAC 1532102
Query 65220 GGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCCACTACCGAAACTATCCA 65279
|| ||||| |||||| |||| | | || | | || | ||||
Sbjct 1532103 CGACTTTGCTTGCCTTCTCTTCTCTCATTTGAAGCACCGCCCAAGCAAGCAAGCCGTCCA 1532162
Query 65280 CGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATG 65339
| | || | | ||||| |||||||||||| | | |||| | || || || || ||
Sbjct 1532163 AGACGTCATTACCGAGGCTGTTGAGATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTG 1532222
Query 65340 TAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCG 65399
||| |||| |||||||| | ||| | ||||| |||| || | |||||
Sbjct 1532223 CGCACTCCTCGGCATGAACTCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCG 1532282
Query 65400 TCTCCTCAAACAAGTTG-GGGTGCCACCCA-----TTTGGAACGCGAAGAATCCATTTGA 65453
|||||| |||| || || | | | | || | || ||||| ||
Sbjct 1532283 TCTCCT------TGTTGCTCTTGGCAACGAGAAGGTCTACAAGTCAGCCAACCCATTCGA 1532336
Query 65454 CTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGA 65513
||| ||||| ||||| |||| || |||||||||||||| |||||||| ||||| ||
Sbjct 1532337 CTTCATGGAGAACATCTCACTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 1532396
Query 65514 CTA 65516
|||
Sbjct 1532397 CTA 1532399
>seq160
Length=1564179
Score = 93.3 bits (102), Expect = 5e-14
Identities = 161/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334
|||||| ||||| || ||||| || |||| | || ||||| ||||| || || |
Sbjct 1275813 TGGTGCTAAGATACCACGAGGTGCTATTCTTTCCGGACCTCCAGGAACGGGTAAAACGTT 1275872
Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA- 175393
| || ||||| || || ||||| | || || ||| || |||| || || ||
Sbjct 1275873 GTTGGCGAAAGCCACTGCTGGCGAATCCCAAGTACCCTTCTTC-AGTG-TCAGCGGCTCC 1275930
Query 175394 -ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452
| || |||||||||||||||||||| ||||| | || || |||||||| | ||
Sbjct 1275931 GAGTTCGTGGAGATGTTTGTTGGTGTTGGTGCTTCCCGAGTACGAGATCTCTTCGCTATG 1275990
Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
|| | ||| | || |||||||| ||||||||||||| ||||||||
Sbjct 1275991 GCAAG-GAAGAACACCCCATGTATCATCTTCATTGATGAAATTGATGC 1276037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568071290400
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