Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq124 192 7e-44 seq93 102 1e-16 seq160 93.3 5e-14 >seq124 Length=198120 Score = 192 bits (212), Expect = 7e-44 Identities = 1077/1693 (64%), Gaps = 57/1693 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| | ||| | ||||| || || | || || ||||| ||||| ||||| ||| Sbjct 126800 CCCACAACATATGATTATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAGGCTGC 126741 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCT 75329 | | ||||||||| || ||||||||| | || |||| || || | ||||| | | Sbjct 126740 CATCGAGACATACAACTTGATGTCCCA-GAAGTGCTTCACCCATGCTTCCCCAACTTTAT 126682 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 || || ||||||||| | | || | || ||||||||||||| || || |||| Sbjct 126681 TCGCCGCCGGTACACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGG 126622 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGC 75447 | || |||||||||| | || | | | | | ||||| | ||||| ||| || Sbjct 126621 ATAGCATTGACGGTATCTACGATACATTGAAG-ACT-TGCGCCATGATCTCCAAGAATGC 126564 Query 75448 TGGGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 75503 ||| || || || ||| || | | ||| | || | | ||| || Sbjct 126563 TGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCTA-CCGGTGCCTAC---ATTGCGG 126508 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || || || | || | ||||| |||| ||||| || || || ||| ||| || Sbjct 126507 GAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCA 126448 Query 75564 GCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTGGAACCA 75619 | || || | |||| | ||| | || ||| | | ||| ||||| | || ||| Sbjct 126447 GATACGTCGACCAAG-GTGGCAACAAGAGACCAGGTGCTTTCGCCATCTACCTCGAGCCA 126389 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || ||| || | |||| |||||| | ||| ||||| || | || || | Sbjct 126388 TGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTC 126329 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | | |||||||| | || ||||||| || || || ||||||||||| |||||| Sbjct 126328 CGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAG 126269 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || ||| | ||| || | | || || || || ||||| | | || | Sbjct 126268 AAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTAT 126209 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTA------TGAAGAGGAGGGTAGAGCCAAT 75853 ||||| ||||| || || || ||| ||||| ||||| ||||| | ||| Sbjct 126208 GGTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCG---CAA- 126153 Query 75854 GCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912 ||| | | || | | || ||||| | | || | | ||||||| |||||||| Sbjct 126152 --GACCAT-CAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGG 126096 Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972 | |||| ||||| |||||||||||||| || | ||||| ||||| ||||| | || Sbjct 126095 GAATCCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGG 126036 Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032 ||||| ||||| || || ||||| || ||| | |||||| | | |||||| Sbjct 126035 CACAATTCGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGT 125976 Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCAC 76092 ||||||||||| ||||| || | || || || | || ||||| | | | || Sbjct 125975 CGCTGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGTCAACACCAACGATGGTAC 125916 Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 | || | || || || || ||| || || |||| ||| || || ||| | Sbjct 125915 CTACGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAGAACCTGAACAAGAT 125856 Query 76153 CATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||||| || | || || || ||| || ||| || | || ||| | Sbjct 125855 CATTGATGTCAACTACTACCCTGTCCCCGAG---GCCAAGAAGAGCAACTTCCGTCACCG 125799 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGT-GCCGCTACGCAT 76268 |||||||| | | ||||| |||||||| || |||| ||| || | |||| ||| Sbjct 125798 ACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATG-CTTTCTTGGCTCTCCGCCTTCCAT 125740 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || ||| |||||| | | || | ||||| || ||||| || ||||| Sbjct 125739 TCGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCG 125680 Query 76329 CCCTGGAGGC--GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 | || | ||| ||| | || | | || || | || ||||||| || || Sbjct 125679 CTCTCACTTCTTCAGT--TGAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGG 125622 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCA 76445 ||| |||| ||| | || | |||||||| ||| ||||||| || | || | | | Sbjct 125621 TTCACCCGTCTCCAAGGGTGAGCTTCAGTATGACATGTGGG-GTGTCACTCCTACCGACC 125563 Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 || ||||||||| | ||| | | |||||| || | ||| |||| ||||| | Sbjct 125562 TCTGGGACTGGGATACCTTGAAGCAGCAGATCAAGCAGCACGGTGTTCGCAACAGCTTGC 125503 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || |||||||| ||| ||| ||||| | || || || ||||| | Sbjct 125502 TCGTTGCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCG 125443 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | ||||||||| | ||||||||| | | || || ||||| || | |||| Sbjct 125442 AGCCATACACATCCAACATCTACTCTCGTCGTGTTCTTGCTGGTGAATTCCAGGTCGTCA 125383 Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || ||| | || || ||| | || ||||| ||||| | | |||||| | | Sbjct 125382 ACCCATGGCTCCTGAAGGATCTCGTCGATATGGGTCTATGGTCTGACAACATGAAGAACC 125323 Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745 ||| | | |||||||| || || || || | | ||||||| ||| |||||| Sbjct 125322 GCATCATCGCCGATGGTGGTTCTATCCAGAACATTCCCAACATCCCAGCTGACATCAAGG 125263 Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGA--TGTCATTGACATGGCCGCAGA 76803 ||||||| || || ||||| ||| | || || || | | |||||||| || Sbjct 125262 CTCTCTACAAGACCGTCTGGGAGATC--TCTCAACGAACAATCGTCCAGATGGCCGCTGA 125205 Query 76804 TCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGTCCAAC 76860 |||||| |||| ||| |||||| |||| |||| ||| || ||| || ||| || Sbjct 125204 CCGTGGT-GCTTACATCGATCAATCTCAATCGATGAACATCCAT--ATGAAAGATCCCAC 125148 Query 76861 GATGTCCAAGCTC 76873 ||| |||| || Sbjct 125147 AATGGGCAAGATC 125135 >seq93 Length=1762202 Score = 102 bits (112), Expect = 1e-16 Identities = 277/423 (65%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 65100 TGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGG 65159 ||| ||||||||||||||| || || ||| |||| | ||||| |||||||| || Sbjct 1531983 TGTCGAGGGTATCTTCTTCAGTGGATCGTTCGCATCTATCTTCTGGTTAAAGAAGCGTGG 1532042 Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCA 65219 ||||||| | || || ||||| || |||||||| || || || |||||||| ||| Sbjct 1532043 TCTCATGGCTGGTCTGACTTTCTCTAACGAACTTATCTCTCGTGACGAGGGTCTTCACAC 1532102 Query 65220 GGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCCACTACCGAAACTATCCA 65279 || ||||| |||||| |||| | | || | | || | |||| Sbjct 1532103 CGACTTTGCTTGCCTTCTCTTCTCTCATTTGAAGCACCGCCCAAGCAAGCAAGCCGTCCA 1532162 Query 65280 CGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATG 65339 | | || | | ||||| |||||||||||| | | |||| | || || || || || Sbjct 1532163 AGACGTCATTACCGAGGCTGTTGAGATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTG 1532222 Query 65340 TAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCG 65399 ||| |||| |||||||| | ||| | ||||| |||| || | ||||| Sbjct 1532223 CGCACTCCTCGGCATGAACTCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCG 1532282 Query 65400 TCTCCTCAAACAAGTTG-GGGTGCCACCCA-----TTTGGAACGCGAAGAATCCATTTGA 65453 |||||| |||| || || | | | | || | || ||||| || Sbjct 1532283 TCTCCT------TGTTGCTCTTGGCAACGAGAAGGTCTACAAGTCAGCCAACCCATTCGA 1532336 Query 65454 CTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGA 65513 ||| ||||| ||||| |||| || |||||||||||||| |||||||| ||||| || Sbjct 1532337 CTTCATGGAGAACATCTCACTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 1532396 Query 65514 CTA 65516 ||| Sbjct 1532397 CTA 1532399 >seq160 Length=1564179 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/228 (71%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| ||||| || ||||| || |||| | || ||||| ||||| || || | Sbjct 1275813 TGGTGCTAAGATACCACGAGGTGCTATTCTTTCCGGACCTCCAGGAACGGGTAAAACGTT 1275872 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA- 175393 | || ||||| || || ||||| | || || ||| || |||| || || || Sbjct 1275873 GTTGGCGAAAGCCACTGCTGGCGAATCCCAAGTACCCTTCTTC-AGTG-TCAGCGGCTCC 1275930 Query 175394 -ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || |||||||||||||||||||| ||||| | || || |||||||| | || Sbjct 1275931 GAGTTCGTGGAGATGTTTGTTGGTGTTGGTGCTTCCCGAGTACGAGATCTCTTCGCTATG 1275990 Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || | ||| | || |||||||| ||||||||||||| |||||||| Sbjct 1275991 GCAAG-GAAGAACACCCCATGTATCATCTTCATTGATGAAATTGATGC 1276037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568071290400