Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq93 104 4e-17
>seq93
Length=1762202
Score = 104 bits (114), Expect = 4e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | || || | || ||||| | ||| | ||| || ||| || || || |
Sbjct 806566 ACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTC-GC 806508
Query 171902 TAAAGAT-CGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960
| ||| | || | || |||||||| ||||||||||| || |||| ||| ||||||||||
Sbjct 806507 TCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTG 806448
Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020
| || || || ||||| || || || || ||||| || || |||||||| || |
Sbjct 806447 GAATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCA 806388
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||| | || || || || ||||| || || || | || ||||||||
Sbjct 806387 CTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905133680589000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |