Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq160 111 2e-18
seq93 111 2e-18
seq124 95.1 1e-13
>seq160
Length=1564179
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
||||||||||||| |||||||| || || || |||| |||||| | || ||||| ||||
Sbjct 660590 CCAACTACCTCGATATCAAGCCCCTCCTTGACGTTGGTTGCAAGACCGTTGCCAATATGA 660649
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||| ||||| || |||||||| || ||||| || ||||||| | |||
Sbjct 660650 TCAAGGGAAAGTCCCCAGAGGAGATTCGAAAGACATTCAACATCACGAACG 660700
>seq93
Length=1762202
Score = 111 bits (122), Expect = 2e-18
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| || || || ||| |||||| ||||||||||| || | || ||||| ||||||
Sbjct 1532400 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCAT 1532341
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| ||| ||||||| | ||||||| ||| ||| || || | | || || ||
Sbjct 1532340 GAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACAAGGAGACG 1532281
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
|| || || ||||||||||| || ||||||| || ||||||||||| ||| ||
Sbjct 1532280 ATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCGCA 1532221
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924
|| || | |||| ||| ||||| | ||| ||||| || ||||||
Sbjct 1532220 AGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCG 1532175
>seq124
Length=198120
Score = 95.1 bits (104), Expect = 1e-13
Identities = 193/287 (67%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||| | || |||| ||| ||||| || |||||||| |||| ||||||||
Sbjct 126435 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAG 126494
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| ||||| || ||||| | |||||| |||| || || | ||| | | |||
Sbjct 126495 TTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACCG 126554
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || || || ||||||||| | ||||| || | || |||||||| || ||
Sbjct 126555 ATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCA 126614
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| || | |||||||| | || ||||| || ||| ||| | || | || |||
Sbjct 126615 ATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCG 126674
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352
||| ||| | || || | || |||||| ||| | | |||||
Sbjct 126675 GCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACAT 126721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107122376739985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |