Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq160 111 2e-18 seq93 111 2e-18 seq124 95.1 1e-13 >seq160 Length=1564179 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 ||||||||||||| |||||||| || || || |||| |||||| | || ||||| |||| Sbjct 660590 CCAACTACCTCGATATCAAGCCCCTCCTTGACGTTGGTTGCAAGACCGTTGCCAATATGA 660649 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||| ||||| || |||||||| || ||||| || ||||||| | ||| Sbjct 660650 TCAAGGGAAAGTCCCCAGAGGAGATTCGAAAGACATTCAACATCACGAACG 660700 >seq93 Length=1762202 Score = 111 bits (122), Expect = 2e-18 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || || ||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 1532400 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCAT 1532341 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| | ||||||| ||| ||| || || | | || || || Sbjct 1532340 GAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACAAGGAGACG 1532281 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 || || || ||||||||||| || ||||||| || ||||||||||| ||| || Sbjct 1532280 ATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCGCA 1532221 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 || || | |||| ||| ||||| | ||| ||||| || |||||| Sbjct 1532220 AGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCG 1532175 >seq124 Length=198120 Score = 95.1 bits (104), Expect = 1e-13 Identities = 193/287 (67%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| | || |||| ||| ||||| || |||||||| |||| |||||||| Sbjct 126435 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAG 126494 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | ||||| || ||||| | |||||| |||| || || | ||| | | ||| Sbjct 126495 TTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACCG 126554 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || ||||||||| | ||||| || | || |||||||| || || Sbjct 126555 ATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCA 126614 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || | |||||||| | || ||||| || ||| ||| | || | || ||| Sbjct 126615 ATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCG 126674 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 ||| ||| | || || | || |||||| ||| | | ||||| Sbjct 126675 GCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACAT 126721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107122376739985