Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq93 129 5e-25
>seq93
Length=1762202
Score = 129 bits (142), Expect = 5e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || || || || || || ||| | ||
Sbjct 806111 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTTGAATCATCC 806170
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || |||| ||| | ||||| ||||| || || || || || ||||||||
Sbjct 806171 GACACAATCGACAACGTTAAGTC-GAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 806229
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||||| | ||||| ||||| || || |||||||| |||| | ||||||| || ||
Sbjct 806230 GCAACGTCTTATCTTCGCCGGTAAGCAATTGGAGGATGGCAGAACCCTGTCAGACTACAA 806289
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || || || ||||||||
Sbjct 806290 TATTCAGAAGGAGTCCACCCTGCACTTGGT 806319
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || | ||||| || | |
Sbjct 806339 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAAGTGGAGTCGTCA 806398
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||| || || || || || || || || || ||
Sbjct 806399 GACACCATTGACAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCACCTGACCAG 806458
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || || |||||||| | | | || || || |||
Sbjct 806459 CAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACCTTGAGCGACTACAAC 806518
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||||||||| || || || || ||||||
Sbjct 806519 ATTCAAAAGGAGTCAACTCTCCATTTGGTG 806548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896447137400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |