Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq160 111 2e-18
seq93 107 3e-17
seq71 91.5 2e-12
>seq160
Length=1564179
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
||||||||||||| |||||||||||||| || | || ||||||||||| ||||| | |
Sbjct 660590 CCAACTACCTCGATATCAAGCCCCTCCTTGACGTTGGTTGCAAGACCGTTGCCAATATGA 660649
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
||||||| ||||| || ||||| || || ||||| || ||||||| | |||
Sbjct 660650 TCAAGGGAAAGTCCCCAGAGGAGATTCGAAAGACATTCAACATCACGAACG 660700
>seq93
Length=1762202
Score = 107 bits (118), Expect = 3e-17
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| |||||| ||||||||||| || | || ||||| ||||||
Sbjct 1532399 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCATG 1532340
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| ||| |||||||| | | |||| ||||||| || || | |||| || ||
Sbjct 1532339 AAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACAAGGAGACGA 1532280
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087
|| || ||||| || ||||| || ||||||| || ||||||||||| ||| ||
Sbjct 1532279 TCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCGCAA 1532220
Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139
|| || | |||| | | ||||| | ||| ||||| || |||||| | ||||
Sbjct 1532219 GGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168
>seq71
Length=3933241
Score = 91.5 bits (100), Expect = 2e-12
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
||||||||||| ||| | || ||||| || |||||||| | ||| | ||| ||
Sbjct 255916 AGATCAATCTTCGAGTCCGCATCGCTTGCACTCATCTTTGCAGCCTCTCCCAAGCCTGGT 255975
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGC--GGTAGCCCAGCGCCGGCAGGTGGTCGC 2411500
|||| || ||| | || || ||| | | |||||| | | ||||| | ||
Sbjct 255976 ACCATCGAGTTCATCAAATG--TGCCCGGACCTTGTAGCCAATCTTTGGCAGATTCTCCA 256033
Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560
|||| || | |||||||| | ||||| || ||||| || |||||||| |||||||
Sbjct 256034 GCGCGAATGTGAAGATCTTTCTTTGGTCAACTCCTCCAAATTGAGCGTCGACATCGAGGT 256093
Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGA 2411593
|||||||| |||| |||||||| |||||||
Sbjct 256094 ATTGCTCGTCCAGGGATTGCATGAGGGGGTAGA 256126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916224593214995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |