Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq62 134 9e-27 seq93 113 3e-20 seq99 86.0 4e-12 >seq62 Length=1271336 Score = 134 bits (148), Expect = 9e-27 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||||||||| |||||||| ||| |||| |||| || ||||||||||| || |||| Sbjct 898281 CCTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGA 898340 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | ||||||||||| | || || |||||| Sbjct 898341 TCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 898400 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || ||| |||||| |||| || |||||||| ||||| |||||||| || | Sbjct 898401 CGATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 898460 Query 34968 AG 34969 || Sbjct 898461 AG 898462 >seq93 Length=1762202 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| |||||||||||| || ||||| || ||| | | |||| Sbjct 806322 AGGACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCC 806263 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||||||||| || |||||||| || | || | |||||||| || Sbjct 806262 TCCAATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCT 806203 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | || || |||| || |||||| Sbjct 806202 TGAATCTTCGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTC 806143 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||| || ||||||||||| Sbjct 806142 TTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 806111 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| || || ||||| || ||| | || |||| Sbjct 806094 AGGACGAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCATCT 806035 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || ||||||||||| ||||| ||||| | || | || |||||||| Sbjct 806034 TCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCC 805975 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || || || || | ||| |||||| Sbjct 805974 TGGATCTTCGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTC 805915 Query 34946 TTTCCCGTGAGGGTCTTTACAA 34967 ||||| || |||||||| |||| Sbjct 805914 TTTCCAGTCAGGGTCTTGACAA 805893 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||| ||||| || ||||| ||||| || |||| | || Sbjct 805811 AGGACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCT 805752 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||||| ||||| ||||| | || | ||||||||||| Sbjct 805751 TCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 805692 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || ||||||| || ||| ||| || || | ||| || Sbjct 805691 TGAATCTTGCTCTTTAC--AT--TATCGATGGTATCGCTGGACTCAACCTCGAGGGTGAT 805636 Query 34942 GGTCTTTCCCGTGA 34955 |||||| || |||| Sbjct 805635 GGTCTTGCCAGTGA 805622 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| | | | || |||| |||| |||||| || || || Sbjct 806530 CTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAA 806471 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| |||||||| | || | |||||||| || | || ||| ||||| Sbjct 806470 GATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTGACATT 806411 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | || || ||||| || || | ||||| || Sbjct 806410 GTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGAC 806351 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 806350 AAAGATCTGCATG 806338 >seq99 Length=1752785 Score = 86.0 bits (94), Expect = 4e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| || || ||| | || |||| || |||||||| || ||||||| Sbjct 456628 CCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGA 456569 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| ||||| ||||| | || | || |||||||| | || || |||||| Sbjct 456568 TCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 456509 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | ||| || || | ||| || ||||| |||||||||||||| || | Sbjct 456508 CGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGA 456449 Query 34968 AG 34969 || Sbjct 456448 AG 456447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691986276895