Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq62 134 9e-27
seq93 113 3e-20
seq99 86.0 4e-12
>seq62
Length=1271336
Score = 134 bits (148), Expect = 9e-27
Identities = 139/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||||||||| |||||||| ||| |||| |||| || ||||||||||| || ||||
Sbjct 898281 CCTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGA 898340
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 898341 TCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 898400
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || ||| |||||| |||| || |||||||| ||||| |||||||| || |
Sbjct 898401 CGATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 898460
Query 34968 AG 34969
||
Sbjct 898461 AG 898462
>seq93
Length=1762202
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | |||| |||||||||||| || ||||| || ||| | | ||||
Sbjct 806322 AGGACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCC 806263
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| |||||| ||||||||||| || |||||||| || | || | |||||||| ||
Sbjct 806262 TCCAATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCT 806203
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | || || |||| || ||||||
Sbjct 806202 TGAATCTTCGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTC 806143
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | |||||| || |||||||||||
Sbjct 806142 TTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 806111
Score = 104 bits (114), Expect = 2e-17
Identities = 144/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | |||| ||||||||| || || ||||| || ||| | || ||||
Sbjct 806094 AGGACGAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCATCT 806035
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || ||||||||||| ||||| ||||| | || | || ||||||||
Sbjct 806034 TCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCC 805975
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || || || || || | ||| ||||||
Sbjct 805974 TGGATCTTCGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTC 805915
Query 34946 TTTCCCGTGAGGGTCTTTACAA 34967
||||| || |||||||| ||||
Sbjct 805914 TTTCCAGTCAGGGTCTTGACAA 805893
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/194 (71%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| ||| ||||| || ||||| ||||| || |||| | ||
Sbjct 805811 AGGACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCT 805752
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| |||||||||| ||||| ||||| | || | |||||||||||
Sbjct 805751 TCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 805692
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || ||||||| || ||| ||| || || | ||| ||
Sbjct 805691 TGAATCTTGCTCTTTAC--AT--TATCGATGGTATCGCTGGACTCAACCTCGAGGGTGAT 805636
Query 34942 GGTCTTTCCCGTGA 34955
|||||| || ||||
Sbjct 805635 GGTCTTGCCAGTGA 805622
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| ||||| | | | || |||| |||| |||||| || || ||
Sbjct 806530 CTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAA 806471
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| |||||||| | || | |||||||| || | || ||| |||||
Sbjct 806470 GATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTGACATT 806411
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | || | ||| || || | || || ||||| || || | ||||| ||
Sbjct 806410 GTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGAC 806351
Query 34966 AAAGATCTGCATG 34978
|||||||||||||
Sbjct 806350 AAAGATCTGCATG 806338
>seq99
Length=1752785
Score = 86.0 bits (94), Expect = 4e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || ||||| || || ||| | || |||| || |||||||| || |||||||
Sbjct 456628 CCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGA 456569
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| ||||| ||||| | || | || |||||||| | || || ||||||
Sbjct 456568 TCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 456509
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | ||| || || | ||| || ||||| |||||||||||||| || |
Sbjct 456508 CGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGA 456449
Query 34968 AG 34969
||
Sbjct 456448 AG 456447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691986276895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |