Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq93 131 1e-25
>seq93
Length=1762202
Score = 131 bits (144), Expect = 1e-25
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629
||| ||||||||||| || || || || ||||||||||| || || | ||| ||| |||
Sbjct 806554 ACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAA-GGTACGAC 806496
Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689
||| || | ||| || |||||| | ||||||| ||||| || || ||||||||||| |
Sbjct 806495 CATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCT 806436
Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748
| || || ||| |||| |||||| | || | ||||| || || ||||| | ||
Sbjct 806435 TATCCTG-AATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTG 806377
Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || ||||| ||||||||
Sbjct 806376 ATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218237553905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |