Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq93 107 2e-18 seq99 105 6e-18 >seq93 Length=1762202 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| |||||||| ||| | || | | | || ||||| | Sbjct 806086 ATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCA-TCTTCGAGTT 806028 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || || || || |||||||||||||||||||||||||| ||||| Sbjct 806027 GCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCT 805968 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | ||||||| || || || || | ||||| ||| || || | Sbjct 805967 TCGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTCTTTCCAG 805908 Query 133636 TCAGAGTTTTTAC 133648 |||| || || || Sbjct 805907 TCAGGGTCTTGAC 805895 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| || || || ||||| |||| || || ||| | ||||| | Sbjct 806544 AAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCA-TCCTCCAA 806486 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || | || | ||||||||||| || || || || ||||| || || Sbjct 806485 TTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAAT 806426 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||||| | |||| ||||| | | |||||| || | |||| || ||||| Sbjct 806425 CTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCC 806366 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||| || || || ||||||||| Sbjct 806365 AGTCAAAGTCTTGACAAAGATCTGCATG 806338 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||||||||| ||||| ||||| | ||| ||| || |||||||| || Sbjct 805796 GTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCTTCAAGCTGCTTTCCA 805737 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | || || |||||||| || ||||| |||||||| ||||| ||| Sbjct 805736 GCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTT 805677 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | || ||| ||| ||| || |||| ||||| ||| ||||| || Sbjct 805676 ACATTATCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 805624 >seq99 Length=1752785 Score = 105 bits (116), Expect = 6e-18 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 || || || |||||||||| || || | | | |||||||| |||||||| ||| | || Sbjct 456626 TTTTGGATGTTGTAATCGCTCAGGGTACGGCCA-TCCTCGAGTTGCTTGCCAGCGAAGAT 456568 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || || || |||||||| ||||| ||||||||||| |||||| ||||| | || Sbjct 456567 CAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTC 456508 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | |||||| |||| ||||| || ||||| || || || || ||||| Sbjct 456507 GATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGAA 456448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419561234200