Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq93 107 2e-18
seq99 105 6e-18
>seq93
Length=1762202
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| |||||||| ||| | || | | | || ||||| |
Sbjct 806086 ATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCA-TCTTCGAGTT 806028
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || || || |||||||||||||||||||||||||| |||||
Sbjct 806027 GCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCT 805968
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | ||||||| || || || || | ||||| ||| || || |
Sbjct 805967 TCGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTCTTTCCAG 805908
Query 133636 TCAGAGTTTTTAC 133648
|||| || || ||
Sbjct 805907 TCAGGGTCTTGAC 805895
Score = 89.7 bits (98), Expect = 5e-13
Identities = 146/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| || || || ||||| |||| || || ||| | ||||| |
Sbjct 806544 AAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCA-TCCTCCAA 806486
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || | || | ||||||||||| || || || || ||||| || ||
Sbjct 806485 TTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAAT 806426
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|||| ||||| | |||| ||||| | | |||||| || | |||| || |||||
Sbjct 806425 CTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCC 806366
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| ||| || || || |||||||||
Sbjct 806365 AGTCAAAGTCTTGACAAAGATCTGCATG 806338
Score = 82.4 bits (90), Expect = 7e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||||||||| ||||| ||||| | ||| ||| || |||||||| ||
Sbjct 805796 GTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCTTCAAGCTGCTTTCCA 805737
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || | || || |||||||| || ||||| |||||||| ||||| |||
Sbjct 805736 GCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTT 805677
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
| | || | || ||| ||| ||| || |||| ||||| ||| ||||| ||
Sbjct 805676 ACATTATCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 805624
>seq99
Length=1752785
Score = 105 bits (116), Expect = 6e-18
Identities = 133/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
|| || || |||||||||| || || | | | |||||||| |||||||| ||| | ||
Sbjct 456626 TTTTGGATGTTGTAATCGCTCAGGGTACGGCCA-TCCTCGAGTTGCTTGCCAGCGAAGAT 456568
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| || || |||||||| ||||| ||||||||||| |||||| ||||| | ||
Sbjct 456567 CAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTC 456508
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||| | | |||||| |||| ||||| || ||||| || || || || |||||
Sbjct 456507 GATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGAA 456448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419561234200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |