Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq93 109 4e-19 >seq93 Length=1762202 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||||||| ||||| ||| ||||| |||||||| ||| Sbjct 806566 ACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCT 806507 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || |||||||| || || ||||| ||||| |||||||| || | || Sbjct 806506 CAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGG 806447 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||| || || || ||| || || | |||| |||| |||||| || |||| Sbjct 806446 AATACCCTCCTTATCCTGAATCTT-TGACTTGACATTGTCAATGGTGTCTGACGACTCCA 806388 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || || || || |||||||||||||| Sbjct 806387 CTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || || ||| ||| || || || ||||| || || Sbjct 806337 CCACCACGAAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGAC 806278 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || |||||||| || ||||| || || | ||| |||||||| | || Sbjct 806277 AGGGTTCTGCCATCCTCCAATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGG 806218 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || ||| ||| || ||| | ||| | |||||| |||||| || Sbjct 806217 ATACCCTCCTTATCTTGAATCTTCGACTT-AACGTTGTCGATTGTGTCGGATGATTCAAC 806159 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || || || || || |||||||||||| Sbjct 806158 CTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATA 806110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703178753600