Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq93 109 4e-19
>seq93
Length=1762202
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||||||| ||||| ||| ||||| |||||||| |||
Sbjct 806566 ACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCT 806507
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || || | || |||||||| || || ||||| ||||| |||||||| || | ||
Sbjct 806506 CAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGG 806447
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||| || || || ||| || || | |||| |||| |||||| || ||||
Sbjct 806446 AATACCCTCCTTATCCTGAATCTT-TGACTTGACATTGTCAATGGTGTCTGACGACTCCA 806388
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || || || || ||||||||||||||
Sbjct 806387 CTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | ||||| || || ||| ||| || || || ||||| || ||
Sbjct 806337 CCACCACGAAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGAC 806278
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || | | || |||||||| || ||||| || || | ||| |||||||| | ||
Sbjct 806277 AGGGTTCTGCCATCCTCCAATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGG 806218
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || || || ||| ||| || ||| | ||| | |||||| |||||| ||
Sbjct 806217 ATACCCTCCTTATCTTGAATCTTCGACTT-AACGTTGTCGATTGTGTCGGATGATTCAAC 806159
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||| ||||| || || || || || || || || ||||||||||||
Sbjct 806158 CTCAAGAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATA 806110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703178753600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |