Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq93 91.5 1e-13
>seq93
Length=1762202
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || || |||||||| | ||||| | || || ||| | |
Sbjct 806111 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTTGAATCATCC 806170
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || || ||| ||||| |||||||| || |||||||||
Sbjct 806171 GACACAATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAG 806230
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352
||| | || || | || ||| || ||| | || |||| |||| ||||| || ||||
Sbjct 806231 CAACGTCTTATCTTCGCCGGTAAGCAATTGGAGGATGGCAGAACCCTGTCA--GACTACA 806288
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGT 25383
||||||| || || |||||| | || || ||
Sbjct 806289 ATATTCAGAAGGAGTCCACCCTGCACTTGGT 806319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093259445600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |