Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq93 145 7e-30
seq62 96.9 3e-15
seq99 87.8 2e-12
>seq93
Length=1762202
Score = 145 bits (160), Expect = 7e-30
Identities = 174/235 (74%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561
|||||| |||||||| | | | ||||||||| | || |||||||||||||||||
Sbjct 806573 TTTATTGACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGT 806514
Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621
| ||| |||||| || | || |||| |||||||| ||||| ||||| ||||||||||
Sbjct 806513 AGTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGT 806454
Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681
| | |||| | |||||| ||| |||||| ||| | | | | | ||||| ||
Sbjct 806453 CAGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACG 806394
Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| ||||| |||| ||||| || || || |||||||| || ||||| ||||||||
Sbjct 806393 ACTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339
>seq62
Length=1271336
Score = 96.9 bits (106), Expect = 3e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| ||||||||||| || | | ||| || | || || || ||||| || ||||| |
Sbjct 898281 CCTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGA 898340
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
|||| ||||||||||||| || | | |||||||||| |||||| ||| | ||||
Sbjct 898341 TCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 898399
Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||| ||||| || || ||||| | ||||| || || |||||
Sbjct 898400 TCGATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 898446
>seq99
Length=1752785
Score = 87.8 bits (96), Expect = 2e-12
Identities = 121/167 (72%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
||||||| |||||||||||| || ||| || | || || || ||||| || || || |
Sbjct 456628 CCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGA 456569
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| || || ||||| | || | | ||||||||| |||||| ||| | ||||
Sbjct 456568 TCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGAC-GTTG 456510
Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||||||||| |||||||| | ||||| || || |||||
Sbjct 456509 TCGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGT 456463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792444841400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |