Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq124 208 1e-48 >seq124 Length=198120 Score = 208 bits (230), Expect = 1e-48 Identities = 520/782 (66%), Gaps = 12/782 (2%) Strand=Plus/Plus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || || || || | ||| || |||||| | || || || |||||||| || || || Sbjct 126030 ATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAAT 126089 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 ||| | ||||| || |||| | || | || || | ||||| | || || || Sbjct 126090 GGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTTTCTGTGCCTTGAT- 126148 Query 69472 ACGGTCTTGTAACGCTTCTCTTTT---TCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526 ||||||| || ||| ||| || || || | ||||| |||| ||||| |||| Sbjct 126149 --GGTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCC--TCGAACTCAT 126204 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | |||||| |||| || || || || || || |||||||| | |||| | ||| Sbjct 126205 CACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCAT 126264 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646 | || ||| || ||||| || ||||| || ||||| | || |||||||| | | Sbjct 126265 TCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAG 126324 Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706 || ||| || || || || ||| ||||| || |||| | | ||| | | Sbjct 126325 CTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGT 126384 Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766 ||||||| || || || || || | | || |||| || || || || || || | || Sbjct 126385 GCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGT 126444 Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826 ||||||||||||| || |||| | ||||| |||| ||||| || || || || || | Sbjct 126445 ATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCG 126504 Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886 |||| | ||| || || | || ||||| || | ||||| ||||| || | Sbjct 126505 TTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACCGATTCCACCAG 126564 Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946 | | || ||||| | || ||| |||||||| || || ||||| || |||||||| | Sbjct 126565 CATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCT 126624 Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006 || |||||| | ||| || || ||| | ||| ||| || || || |||| Sbjct 126625 CTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATA 126684 Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066 | || || || || || ||||| || || | || | || |||||||| || || || | Sbjct 126685 AAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAG 126744 Query 70067 ATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125 || ||||| ||| | ||||| || | || || ||||| | |||||| || || || Sbjct 126745 CCTCAATATCTTCACCG-TGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGC 126803 Query 70126 TC 70127 || Sbjct 126804 TC 126805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907039796200