Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq124 208 1e-48
>seq124
Length=198120
Score = 208 bits (230), Expect = 1e-48
Identities = 520/782 (66%), Gaps = 12/782 (2%)
Strand=Plus/Plus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || || || || | ||| || |||||| | || || || |||||||| || || ||
Sbjct 126030 ATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAAT 126089
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
||| | ||||| || |||| | || | || || | ||||| | || || ||
Sbjct 126090 GGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTTTCTGTGCCTTGAT- 126148
Query 69472 ACGGTCTTGTAACGCTTCTCTTTT---TCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526
||||||| || ||| ||| || || || | ||||| |||| ||||| ||||
Sbjct 126149 --GGTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCC--TCGAACTCAT 126204
Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586
| || | |||||| |||| || || || || || || |||||||| | |||| | |||
Sbjct 126205 CACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCAT 126264
Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646
| || ||| || ||||| || ||||| || ||||| | || |||||||| | |
Sbjct 126265 TCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAG 126324
Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706
|| ||| || || || || ||| ||||| || |||| | | ||| | |
Sbjct 126325 CTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGT 126384
Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766
||||||| || || || || || | | || |||| || || || || || || | ||
Sbjct 126385 GCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGT 126444
Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826
||||||||||||| || |||| | ||||| |||| ||||| || || || || || |
Sbjct 126445 ATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCG 126504
Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886
|||| | ||| || || | || ||||| || | ||||| ||||| || |
Sbjct 126505 TTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACCGATTCCACCAG 126564
Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946
| | || ||||| | || ||| |||||||| || || ||||| || |||||||| |
Sbjct 126565 CATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCT 126624
Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006
|| |||||| | ||| || || ||| | ||| ||| || || || ||||
Sbjct 126625 CTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATA 126684
Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066
| || || || || || ||||| || || | || | || |||||||| || || || |
Sbjct 126685 AAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAG 126744
Query 70067 ATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125
|| ||||| ||| | ||||| || | || || ||||| | |||||| || || ||
Sbjct 126745 CCTCAATATCTTCACCG-TGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGC 126803
Query 70126 TC 70127
||
Sbjct 126804 TC 126805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907039796200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |