Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq124 205 1e-47
seq93 105 8e-18
seq160 93.3 5e-14
>seq124
Length=198120
Score = 205 bits (226), Expect = 1e-47
Identities = 1006/1580 (64%), Gaps = 37/1580 (2%)
Strand=Plus/Plus
Query 110525 ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGG 110584
|| ||||| || || |||||| |||||| ||| ||||||| | | || ||||||
Sbjct 125238 ATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGGATGTTGGGAATGTTCTGG 125297
Query 110585 ATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644
|| ||||| || | | ||| | | |||||| | | ||||| ||||| || |
Sbjct 125298 ATAGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCATAGACCCATATCG 125357
Query 110645 TTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTC 110704
||| || || | ||| |||||| | || ||||| || || | |
Sbjct 125358 ACGAGATCCTTCAGGAGCCATGGGTTGACGACCTGGAATTCACCAGCAAGAACACGACGA 125417
Query 110705 AGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 110764
||||||||| | ||||||||| || ||||| || || || | ||||| |||
Sbjct 125418 GAGTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTA 125477
Query 110765 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824
||| |||||||| || || | | | ||||| |||| ||| | || |||||| |
Sbjct 125478 CTGGCAGTTGGCATGGGAGCAACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGC 125537
Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
| ||| | ||||||||| || | | | || | || ||||||||||| ||||
Sbjct 125538 TGCTTCAAGGTATCCCAGTCCCAGAGGTCGGTAGGAGTGACAC-CCCACATGTCATACTG 125596
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
|||| | || | ||| |||| ||||| || | || || || | || || | | ||
Sbjct 125597 AAGCTCACCCTTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGC 125656
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| ||| | || | ||||| || ||||| || ||||| | || |
Sbjct 125657 AAGCTCAACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAG 125716
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC-ACAAAATAAATACATCCGCGAGAC 111062
| |||||| ||| || || |||| |||| | || ||| |||| || ||||
Sbjct 125717 GTGCTTGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAAG-CATCAGCAAGAC 125775
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---A 111119
|||| ||||| | | ||||||||| ||| || | || ||| || ||| |
Sbjct 125776 CTTGGACACCGACAGCAATAGGTCGGTGACGGAAGTTGCTCTTCTTGGC---CTCGGGGA 125832
Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179
| || || | || ||||||| ||| || || ||| |||| || || ||
Sbjct 125833 CAGGGTAGTAGTTGACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTT 125892
Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239
| || || || || | || | || | | | ||||| || | || || || |
Sbjct 125893 CGTGGAGCTTCGCAAAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAA 125952
Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299
|| ||||| ||||||||||| |||||| | | |||||| | ||| || || |
Sbjct 125953 GGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGC 126012
Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359
| | |||||| || ||| || || | ||||| ||||| ||||| | ||||| ||||
Sbjct 126013 AGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCAT 126072
Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419
|||||||||||||| | || |||| ||||| ||||||| | | || | | |||||
Sbjct 126073 CCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAA 126132
Query 111420 -CATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGC-CTCGTACTTTGTGTAG 111475
|| | | || | |||| || | ||| | ||| | | ||||||||| |||
Sbjct 126133 GTTTCTGTGCCTTG----ATGGTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTAT 126188
Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535
|| || || ||||| ||||| | || | | ||||| || || || || |
Sbjct 126189 AGAGCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATC 126248
Query 111536 AGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595
| || ||| | ||| | |||||| ||||||||||| || || || ||||||| ||
Sbjct 126249 AAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCG 126308
Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655
| |||||||| | | || | || || | || ||||| ||| | |||||| ||
Sbjct 126309 TAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTAC 126368
Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACG 111711
|| | || ||| |||||||||||||| || |||| |||| || || || | | |
Sbjct 126369 TCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTG 126428
Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771
||| |||| | || || | || ||| ||| || || || ||||| |||| |||||
Sbjct 126429 -CCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACC 126487
Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831
| || | || || || ||| ||| | | || | ||| | | ||
Sbjct 126488 GTTGGAGTTTCCGTTCGTTCCCGCAAT---GTAGGCACCGG-TAGCACGAATTCGGTGAA 126543
Query 111832 CAT----CCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCC 111885
||| || || || ||||| ||| ||||| | ||||| | | | | | || |
Sbjct 126544 CATTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCA-AGT-CTTCAATGTATC 126601
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
|||||||||| || ||||| || || ||||||||||||| || | || |
Sbjct 126602 GTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGC 126661
Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACA 112004
| ||||||||| || ||| | ||||| | || || |||| || | |||||||
Sbjct 126662 TTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTC-TGGGACA 126720
Query 112005 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCC 112064
|| || ||||||||| | | ||| ||||| ||||| ||||| || || | || || |
Sbjct 126721 TCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCGTGAATACCAACAGCCACTC 126780
Query 112065 GCATGAACATGTACTGTGGG 112084
|||| | ||| | ||||||
Sbjct 126781 GCATAATCATATGTTGTGGG 126800
>seq93
Length=1762202
Score = 105 bits (116), Expect = 8e-18
Identities = 335/516 (65%), Gaps = 14/516 (3%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || |||||||| |||||||||||||| || |||| ||||| |||||
Sbjct 1532399 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCATG 1532340
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAGG 122484
||||| ||||| || | || | | | | || || |||| |||
Sbjct 1532339 AAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACA------AGG 1532286
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|||||||| | || |||| ||||| | ||| | |||||||| |||| |||
Sbjct 1532285 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGT 1532226
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
|| || || || || | |||| | | |||||||||||| ||||| | | || |
Sbjct 1532225 GCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGACG 1532166
Query 122605 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAAC 122664
| |||| | || | | || | | |||| |||||| |||||
Sbjct 1532165 TCTTGGACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGCAAAG 1532106
Query 122665 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATG 122724
|| ||| |||||||| || || || |||||||| || ||||| ||||| | ||||
Sbjct 1532105 TCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCATG 1532046
Query 122725 AGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCC 122784
||||| |||||||| ||||| | |||| ||| || || |||||||||||||||
Sbjct 1532045 AGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCTCG 1531986
Query 122785 ACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAACCATTT 122843
||| || || || | || |||| || |||| || | ||| | | | |||| |
Sbjct 1531985 ACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAG-CTCTTGTCTTGGATCCATCT 1531927
Query 122844 CATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
| ||||| | |||||||||| || || || ||
Sbjct 1531926 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 1531891
>seq160
Length=1564179
Score = 93.3 bits (102), Expect = 5e-14
Identities = 161/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAG 11688
|||||||| ||||||||||||| |||||||| || | ||| | || || | |||||
Sbjct 1276037 GCATCAATTTCATCAATGAAGATGATACATGGGGTGTTCTTC-CTTGCCATAGCGAAGAG 1275979
Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGT--TTGCGGCAGAG 11746
||| || || | ||||| |||||||||||||||||||| || | || || ||
Sbjct 1275978 ATCTCGTACTCGGGAAGCACCAACACCAACAAACATCTCCACGAACTCGGAGCCGCTGA- 1275920
Query 11747 CACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCC 11806
|||| || ||| || || | ||||| || || ||||| || | | || || |||
Sbjct 1275919 CACT-GAAGAAGGGTACTTGGGATTCGCCAGCAGTGGCTTTCGCCAACAACGTTTTACCC 1275861
Query 11807 GTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854
|| ||||| || | |||| || ||||| || ||||| ||||||
Sbjct 1275860 GTTCCTGGAGGTCCGGAAAGAATAGCACCTCGTGGTATCTTAGCACCA 1275813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030390668000
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