Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq124 197 2e-45
seq93 154 2e-32
seq160 91.5 2e-13
>seq124
Length=198120
Score = 197 bits (218), Expect = 2e-45
Identities = 1115/1752 (64%), Gaps = 59/1752 (3%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|||||||| ||||| || ||||| | ||| ||||||| || | ||||| ||
Sbjct 125076 CGGAGGTAATACATGCCAGTCTTCAAGCCCAACTTCCAGCCAGCGAAGTGCATGCTGGTG 125135
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AA 117955
| |||| | || ||| || ||| || |||||| ||| |||||||||||| ||
Sbjct 125136 ATCTTGCCCATTGTGGGATCTTTCATATGGATGTTCATCGATTGAGATTGATCGATGTAA 125195
Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTC 118013
|| || || || || ||||| | | || ||| | ||| ||||| || |||
Sbjct 125196 GC-ACCACGGTCAGCGGCCATCTGGA--CGATTGTTCGTTGAGAGATCTCCCAGACGGTC 125252
Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073
||||||| ||| || ||| ||||||| | || || ||||| || ||||| |
Sbjct 125253 TTGTAGAGAGCCTTGATGTCAGCTGGGATGTTGGGAATGTTCTGGATAGAACCACCATCG 125312
Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133
|| ||| | | |||||| | | ||||| ||||| || | |||||||| || |
Sbjct 125313 GCGATGATGCGGTTCTTCATGTTGTCAGACCATAGACCCATATCGACGAGATCCTTCAGG 125372
Query 118134 AG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTG 118190
|| ||| ||||| || || ||||| || || || | ||| ||||| |||
Sbjct 125373 AGCCATG--GGTTGACGACCTGGAATTCACCAGCAAGAACACGAC-GAGAGTAGATGTTG 125429
Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGAGGCTGTGGG 118249
| ||||||||||| |||||||| ||| | || ||| || | || || ||| || ||
Sbjct 125430 GATGTGTATGGCTCGAAGCACTCGTTG-AAGCCGAGAATTTGACTGGTACTGGCAGTTGG 125488
Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309
|||||| || | ||| | |||||| || | ||| | | | | || | | ||| | |
Sbjct 125489 CATGGGAGCAACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGT 125548
Query 118310 GTCCCAGTCGTAGTTG-----AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364
|||||||| || | || || | || |||||| ||| |||| || |
Sbjct 125549 ATCCCAGTCCCAGAGGTCGGTAGGAGTGACACC-----CCACATGTCATACTGAAGCTCA 125603
Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424
|| | ||| | || || || || ||||||| ||||| || | ||||| || | ||
Sbjct 125604 CCCTTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCTC- 125662
Query 118425 GAGCT--CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCT 118482
| || | ||| || ||||| || || || || || || | || | ||
Sbjct 125663 -AACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCT 125721
Query 118483 TGGCCTCGTCGGAATCAAACGCGAGTCGG-CACAAAATAAATACATCCGCGAGACCTTGG 118541
||||||| || || || | || ||| | || ||| |||| || |||||||||
Sbjct 125722 TGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAA-GCATCAGCAAGACCTTGG 125780
Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGA 118598
||||||| |||| || || || | | || |||| || ||| || ||
Sbjct 125781 ACACCGACAGCAATAGGTCGGTGACGGAAGTTGCTCTTC---TTGGCCTCGGGGACAGGG 125837
Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658
|| | || ||| || | | | || || || ||| |||||||| || ||| ||
Sbjct 125838 TAGTAGTTGACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGG 125897
Query 118659 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 118718
||||| | | || | | | | | ||||| || | || || || | ||
Sbjct 125898 AGCTTCGCAAAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAA 125957
Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778
|||| || || |||| | |||||| | || |||||| | ||| || ||||| | |
Sbjct 125958 GCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGG 126017
Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838
|| || || ||| ||||| | |||||| || || |||| | || || |||||||||
Sbjct 126018 TTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTG 126077
Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898
|| |||||| |||| |||| ||||| || || | || | || | | ||| | |
Sbjct 126078 TAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTT-- 126135
Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGG 118952
| | || | ||| ||| || |||| |||| ||||||||| ||| ||
Sbjct 126136 TCTG-TGCCTTGATGGTCTTG---CGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGA 126191
Query 118953 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012
|| || ||||| ||||| | | || | | ||||| || | ||||| | | |
Sbjct 126192 GCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAA 126251
Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072
| ||| | ||| || |||||| |||||||||||||| || |||||||| | || ||
Sbjct 126252 GTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAG 126311
Query 119073 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132
|||||||| ||| || |||| || | || || || || | || | | ||
Sbjct 126312 AAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCG 126371
Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACC 119188
| || ||| |||||||| || || ||||| | |||| | ||| || | | ||
Sbjct 126372 AAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTG-CC 126430
Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248
| | |||| || || || |||||| ||| || ||||| ||||| |||| |||||| |
Sbjct 126431 ACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTT 126490
Query 119249 GGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC-GTGGATGTGCA 119307
||| | || || || ||| ||| | | || | || || ||| | | |
Sbjct 126491 GGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCAC-GAATTCGGTGAACATTGA 126549
Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367
||| || || || || ||| ||||| ||||| | | | | ||||||| |
Sbjct 126550 GACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATAC 126609
Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGT 119426
| || || || | || | |||| |||||||| || | ||| || || |||
Sbjct 126610 CGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTG-TGCTTGTGGT 126668
Query 119427 GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTGTC 119485
||||| ||| ||| | |||||| | || ||| |||| || | ||||||||| ||
Sbjct 126669 GTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTC-TGGGACATCAAGTT 126727
Query 119486 GTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 119545
||| ||||| | | | || ||| ||||| ||||||||||| | | || |||||||
Sbjct 126728 GTATGTCTCGATGGCAGCCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAAT 126787
Query 119546 CATGTATTGGGG 119557
||| | ||| ||
Sbjct 126788 CATATGTTGTGG 126799
>seq93
Length=1762202
Score = 154 bits (170), Expect = 2e-32
Identities = 305/449 (68%), Gaps = 2/449 (0%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| ||||||||||||||||| ||||| ||| | | ||| ||||||||
Sbjct 1532399 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCATG 1532340
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || |||||||| ||| || | | | || | |||| ||||||||
Sbjct 1532339 AAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTG-CCAAGAGCAACAAGGAGACG 1532281
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | ||| |||| ||||| | ||| | ||||||||| |||| ||| ||
Sbjct 1532280 ATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCGCA 1532221
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| ||| |||||| || ||||| || | || | | ||
Sbjct 1532220 AGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGACGTCTTG 1532161
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTG 130026
| || | | ||| || | | |||| |||||| ||||| ||
Sbjct 1532160 GACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGCAAAGTCGGT 1532101
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||||||||| ||||| ||||| || ||||| |||||| | |||||||||
Sbjct 1532100 GTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCATGAGACC 1532041
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||| |||||||| || | || || ||| ||||||||| ||||| |||
Sbjct 1532040 ACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCTCGACAGC 1531981
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
||||| || | |||||| | ||||||||
Sbjct 1531980 GGCGAATGCGACGAGACGTTGAGCAAAGG 1531952
>seq160
Length=1564179
Score = 91.5 bits (100), Expect = 2e-13
Identities = 219/323 (68%), Gaps = 10/323 (3%)
Strand=Plus/Minus
Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAG-G 14211
|||||||||||||| ||||||| || || | || ||| | |||||| || || |
Sbjct 1276133 AAGCCATCCATCTCCGTCAAGATCTGGTTAAGCGTAGCTTCTCTTTCATCGTTGCCACCG 1276074
Query 14212 C---AT--ACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACG 14266
| || ||| || | || ||| || | || ||||||||||| ||||| | |
Sbjct 1276073 CCAAATGAACCTGCCTTTCCACGAGCCTTTCCAATTGCATCAATTTCATCAATGAAGATG 1276014
Query 14267 ATACATGGT-TGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGAC 14325
|||||||| || | ||| | || | | |||| |||||| |||| ||||| ||
Sbjct 1276013 ATACATGGGGTGTTCTTC-CTTGCCATAGCGAAGAGATCTCGTACTCGGGAAGCACCAAC 1275955
Query 14326 ACCCACAAACATCTCCACAAAATTGGCGGCG-GAACATTGGATGAAGGGGACGTTAGATT 14384
||| |||||||||||||| || | || | || ||| | || |||||| || | ||||
Sbjct 1275954 ACCAACAAACATCTCCACGAACTCGGAGCCGCTGACACT-GAAGAAGGGTACTTGGGATT 1275896
Query 14385 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGG 14444
| || || ||||| || | | || || ||||| ||||| || | |||| |
Sbjct 1275895 CGCCAGCAGTGGCTTTCGCCAACAACGTTTTACCCGTTCCTGGAGGTCCGGAAAGAATAG 1275836
Query 14445 CACCACGTGGGATCCTGGCACCA 14467
|||| ||||| ||| | ||||||
Sbjct 1275835 CACCTCGTGGTATCTTAGCACCA 1275813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433615259800
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