Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq124 197 2e-45 seq93 154 2e-32 seq160 91.5 2e-13 >seq124 Length=198120 Score = 197 bits (218), Expect = 2e-45 Identities = 1115/1752 (64%), Gaps = 59/1752 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||| ||||| || ||||| | ||| ||||||| || | ||||| || Sbjct 125076 CGGAGGTAATACATGCCAGTCTTCAAGCCCAACTTCCAGCCAGCGAAGTGCATGCTGGTG 125135 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AA 117955 | |||| | || ||| || ||| || |||||| ||| |||||||||||| || Sbjct 125136 ATCTTGCCCATTGTGGGATCTTTCATATGGATGTTCATCGATTGAGATTGATCGATGTAA 125195 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTC 118013 || || || || || ||||| | | || ||| | ||| ||||| || ||| Sbjct 125196 GC-ACCACGGTCAGCGGCCATCTGGA--CGATTGTTCGTTGAGAGATCTCCCAGACGGTC 125252 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 ||||||| ||| || ||| ||||||| | || || ||||| || ||||| | Sbjct 125253 TTGTAGAGAGCCTTGATGTCAGCTGGGATGTTGGGAATGTTCTGGATAGAACCACCATCG 125312 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 || ||| | | |||||| | | ||||| ||||| || | |||||||| || | Sbjct 125313 GCGATGATGCGGTTCTTCATGTTGTCAGACCATAGACCCATATCGACGAGATCCTTCAGG 125372 Query 118134 AG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTG 118190 || ||| ||||| || || ||||| || || || | ||| ||||| ||| Sbjct 125373 AGCCATG--GGTTGACGACCTGGAATTCACCAGCAAGAACACGAC-GAGAGTAGATGTTG 125429 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGAGGCTGTGGG 118249 | ||||||||||| |||||||| ||| | || ||| || | || || ||| || || Sbjct 125430 GATGTGTATGGCTCGAAGCACTCGTTG-AAGCCGAGAATTTGACTGGTACTGGCAGTTGG 125488 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 |||||| || | ||| | |||||| || | ||| | | | | || | | ||| | | Sbjct 125489 CATGGGAGCAACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGT 125548 Query 118310 GTCCCAGTCGTAGTTG-----AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364 |||||||| || | || || | || |||||| ||| |||| || | Sbjct 125549 ATCCCAGTCCCAGAGGTCGGTAGGAGTGACACC-----CCACATGTCATACTGAAGCTCA 125603 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | ||| | || || || || ||||||| ||||| || | ||||| || | || Sbjct 125604 CCCTTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCTC- 125662 Query 118425 GAGCT--CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCT 118482 | || | ||| || ||||| || || || || || || | || | || Sbjct 125663 -AACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCT 125721 Query 118483 TGGCCTCGTCGGAATCAAACGCGAGTCGG-CACAAAATAAATACATCCGCGAGACCTTGG 118541 ||||||| || || || | || ||| | || ||| |||| || ||||||||| Sbjct 125722 TGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAA-GCATCAGCAAGACCTTGG 125780 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGA 118598 ||||||| |||| || || || | | || |||| || ||| || || Sbjct 125781 ACACCGACAGCAATAGGTCGGTGACGGAAGTTGCTCTTC---TTGGCCTCGGGGACAGGG 125837 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 || | || ||| || | | | || || || ||| |||||||| || ||| || Sbjct 125838 TAGTAGTTGACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGG 125897 Query 118659 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 118718 ||||| | | || | | | | | ||||| || | || || || | || Sbjct 125898 AGCTTCGCAAAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAA 125957 Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 |||| || || |||| | |||||| | || |||||| | ||| || ||||| | | Sbjct 125958 GCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGG 126017 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || || || ||| ||||| | |||||| || || |||| | || || ||||||||| Sbjct 126018 TTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTG 126077 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898 || |||||| |||| |||| ||||| || || | || | || | | ||| | | Sbjct 126078 TAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTT-- 126135 Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGG 118952 | | || | ||| ||| || |||| |||| ||||||||| ||| || Sbjct 126136 TCTG-TGCCTTGATGGTCTTG---CGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGA 126191 Query 118953 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012 || || ||||| ||||| | | || | | ||||| || | ||||| | | | Sbjct 126192 GCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAA 126251 Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072 | ||| | ||| || |||||| |||||||||||||| || |||||||| | || || Sbjct 126252 GTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAG 126311 Query 119073 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132 |||||||| ||| || |||| || | || || || || | || | | || Sbjct 126312 AAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCG 126371 Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACC 119188 | || ||| |||||||| || || ||||| | |||| | ||| || | | || Sbjct 126372 AAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTG-CC 126430 Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248 | | |||| || || || |||||| ||| || ||||| ||||| |||| |||||| | Sbjct 126431 ACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTT 126490 Query 119249 GGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC-GTGGATGTGCA 119307 ||| | || || || ||| ||| | | || | || || ||| | | | Sbjct 126491 GGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCAC-GAATTCGGTGAACATTGA 126549 Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367 ||| || || || || ||| ||||| ||||| | | | | ||||||| | Sbjct 126550 GACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATAC 126609 Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGT 119426 | || || || | || | |||| |||||||| || | ||| || || ||| Sbjct 126610 CGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTG-TGCTTGTGGT 126668 Query 119427 GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTGTC 119485 ||||| ||| ||| | |||||| | || ||| |||| || | ||||||||| || Sbjct 126669 GTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTC-TGGGACATCAAGTT 126727 Query 119486 GTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 119545 ||| ||||| | | | || ||| ||||| ||||||||||| | | || ||||||| Sbjct 126728 GTATGTCTCGATGGCAGCCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAAT 126787 Query 119546 CATGTATTGGGG 119557 ||| | ||| || Sbjct 126788 CATATGTTGTGG 126799 >seq93 Length=1762202 Score = 154 bits (170), Expect = 2e-32 Identities = 305/449 (68%), Gaps = 2/449 (0%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 1532399 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCATG 1532340 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || |||||||| ||| || | | | || | |||| |||||||| Sbjct 1532339 AAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTG-CCAAGAGCAACAAGGAGACG 1532281 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | ||| |||| ||||| | ||| | ||||||||| |||| ||| || Sbjct 1532280 ATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCGCA 1532221 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| ||| |||||| || ||||| || | || | | || Sbjct 1532220 AGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGACGTCTTG 1532161 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTG 130026 | || | | ||| || | | |||| |||||| ||||| || Sbjct 1532160 GACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGCAAAGTCGGT 1532101 Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| ||||| ||||| || ||||| |||||| | ||||||||| Sbjct 1532100 GTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCATGAGACC 1532041 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| |||||||| || | || || ||| ||||||||| ||||| ||| Sbjct 1532040 ACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCTCGACAGC 1531981 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| || | |||||| | |||||||| Sbjct 1531980 GGCGAATGCGACGAGACGTTGAGCAAAGG 1531952 >seq160 Length=1564179 Score = 91.5 bits (100), Expect = 2e-13 Identities = 219/323 (68%), Gaps = 10/323 (3%) Strand=Plus/Minus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAG-G 14211 |||||||||||||| ||||||| || || | || ||| | |||||| || || | Sbjct 1276133 AAGCCATCCATCTCCGTCAAGATCTGGTTAAGCGTAGCTTCTCTTTCATCGTTGCCACCG 1276074 Query 14212 C---AT--ACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACG 14266 | || ||| || | || ||| || | || ||||||||||| ||||| | | Sbjct 1276073 CCAAATGAACCTGCCTTTCCACGAGCCTTTCCAATTGCATCAATTTCATCAATGAAGATG 1276014 Query 14267 ATACATGGT-TGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGAC 14325 |||||||| || | ||| | || | | |||| |||||| |||| ||||| || Sbjct 1276013 ATACATGGGGTGTTCTTC-CTTGCCATAGCGAAGAGATCTCGTACTCGGGAAGCACCAAC 1275955 Query 14326 ACCCACAAACATCTCCACAAAATTGGCGGCG-GAACATTGGATGAAGGGGACGTTAGATT 14384 ||| |||||||||||||| || | || | || ||| | || |||||| || | |||| Sbjct 1275954 ACCAACAAACATCTCCACGAACTCGGAGCCGCTGACACT-GAAGAAGGGTACTTGGGATT 1275896 Query 14385 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGG 14444 | || || ||||| || | | || || ||||| ||||| || | |||| | Sbjct 1275895 CGCCAGCAGTGGCTTTCGCCAACAACGTTTTACCCGTTCCTGGAGGTCCGGAAAGAATAG 1275836 Query 14445 CACCACGTGGGATCCTGGCACCA 14467 |||| ||||| ||| | |||||| Sbjct 1275835 CACCTCGTGGTATCTTAGCACCA 1275813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433615259800