Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq124 219 5e-52
seq93 125 8e-24
seq160 109 6e-19
>seq124
Length=198120
Score = 219 bits (242), Expect = 5e-52
Identities = 1122/1751 (64%), Gaps = 55/1751 (3%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
|||||| | ||| | ||||| ||||| | |||||||| || ||||| ||||| |||
Sbjct 126800 CCCACAACATATGATTATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAGGCTGC 126741
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCT 104339
| | ||||||||| || ||||||||| | || |||| || || | ||||| | |
Sbjct 126740 CATCGAGACATACAACTTGATGTCCCA-GAAGTGCTTCACCCATGCTTCCCCAACTTTAT 126682
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|| || ||||||||| | | ||| | || ||||||||||||| || || ||||
Sbjct 126681 TCGCCGCCGGTACACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGG 126622
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGGC 104457
| || |||||||||| | || | | | | | ||||| | ||||| ||| ||
Sbjct 126621 ATAGCATTGACGGTATCTACGATACATTGAAG-ACT-TGCGCCATGATCTCCAAGAATGC 126564
Query 104458 TGGGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513
||| || || || ||| || | | ||| | || | | ||| ||
Sbjct 126563 TGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCTA-CCGGTGCCTAC---ATTGCGG 126508
Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573
| || || || | || | ||||| |||| ||||| || || || ||| ||| ||
Sbjct 126507 GAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCA 126448
Query 104574 GCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCA 104629
| || || | |||| ||| | | | || || || |||| |||| || ||||||
Sbjct 126447 GATACGTCGACCAAGGTGG-CAACAAGAGACCAGGTGCTTTCGCCATCTACCTCGAGCCA 126389
Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689
|||||||| ||| || | |||| |||||| | || ||||| || | ||||| |
Sbjct 126388 TGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTC 126329
Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
|| || |||||||||| ||| | ||||| || ||||||||||||||| | ||||||
Sbjct 126328 CGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAG 126269
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
||| ||| | ||| || | | || || || || || || | | |||| |
Sbjct 126268 AAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTAT 126209
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GA 104867
||||| ||||| || || || ||| ||||||||| ||||| | | | | || ||
Sbjct 126208 GGTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGG-CAAGGGTC-GCAAGA 126151
Query 104868 CGGTGCCAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
| | | || | | | | ||| | | || | || | || ||||||||||| |
Sbjct 126150 CCAT-CAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAAT 126092
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|||| |||||| ||||| || || || || |||||| || || ||||| | ||
Sbjct 126091 CCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGCACA 126032
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
|| || ||||| ||||| || || || |||| | | |||||| |||
Sbjct 126031 ATTCGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGTCGCT 125972
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACAT 105104
|| || ||| | || || | |||||||||| || || | || || | | || |
Sbjct 125971 GTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGTCAA--CACCAACGATGGTACCT 125914
Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
|| | || || ||||||||||| | |||| ||| ||||| |||| | |
Sbjct 125913 ACGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAGAACCTGAACAAGATCA 125854
Query 105165 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221
||||| || | ||||| || ||| | | | | | | || | | ||||| |
Sbjct 125853 TTGATGTCAACTACTACCCTGTCCCCGAGGC--CAAGAAGAGC-AACTTCCGTCACCGAC 125797
Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 105281
| |||| | ||||||| || ||||| || |||| ||| | | |||| |||| |
Sbjct 125796 CTATTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTTTCTTGGCTCTCCGCCTTCCATTCG 125737
Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341
| || || || ||| | |||| | || || |||||||| || ||||||||||
Sbjct 125736 ACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCGCTC 125677
Query 105342 TTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
| | |||| ||| | || ||||| | || ||||| || || | || |||||
Sbjct 125676 TCACTTCTTCAGTT--GAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGGTTC 125619
Query 105400 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCAC 105457
|| | || |||||| | |||||| | ||| ||||||| || | || | | | |
Sbjct 125618 ACCCGTCTC-CAAGGGTGAGCTTCAGTATGACATGTGGG-GTGTCACTCCTACCGACCTC 125561
Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517
| |||||||| | | ||| | | |||||| || | ||| |||| ||||| | |||
Sbjct 125560 TGGGACTGGGATACCTTGAAGCAGCAGATCAAGCAGCACGGTGTTCGCAACAGCTTGCTC 125501
Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577
| ||||| |||||||| ||| ||| ||||| | || || || ||||| ||
Sbjct 125500 GTTGCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCGAG 125441
Query 105578 CCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636
|| ||||| | |||||||| ||| | | || || || || || | | |||||
Sbjct 125440 CCATACACATCCAACATCTACTCT-CGTCGTGTTCTTGCTGGTGAATTCCAGGTCGTCAA 125382
Query 105637 CAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 105694
| ||| ||| || | || ||| || || ||||| ||||| | | |||||| |
Sbjct 125381 C--CCATGGCTCCTGAAGGATCTCGTCGATATGGGTCTATGGTCTGACAACATGAAGAAC 125324
Query 105695 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAG 105754
| ||| | | |||||||| || || || ||| | || ||| ||| || |||
Sbjct 125323 CGCATCATCGCCGATGGTGGTTCTATCCAGAACATTCCCAACATCCCAGCTGACATCAAG 125264
Query 105755 AAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA--TGTCATTGACATGGCCGCAG 105812
| ||| || || ||||| ||| | || || || | | |||||||| |
Sbjct 125263 GCTCTCTACAAGACCGTCTGGGAGATC--TCTCAACGAACAATCGTCCAGATGGCCGCTG 125206
Query 105813 ATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACG 105871
| |||||| |||| ||| |||||| |||| ||||| || ||| || ||| ||
Sbjct 125205 ACCGTGGT-GCTTACATCGATCAATCTCAATCGATGAACATCCATATGAAAGATCCCACA 125147
Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931
||| |||| || | |||||| | | |||||| ||| | || || || |||
Sbjct 125146 ATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGTTGGGCTTGAAGACTGGCATG 125087
Query 105932 TATTACCTCCG 105942
|||||||||||
Sbjct 125086 TATTACCTCCG 125076
>seq93
Length=1762202
Score = 125 bits (138), Expect = 8e-24
Identities = 347/521 (67%), Gaps = 22/521 (4%)
Strand=Plus/Plus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||||| || || | ||||| || || |||||| | | ||| | | |||| | |
Sbjct 1531890 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGATGGATCCAAGACAAGAGCTC 1531949
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| |||||||| | || ||| ||||||| || ||| ||||||||||||||| ||| |
Sbjct 1531950 -TACCTTTGCTCAACGTCTCGTCGCATTCGCCGCTGTCGAGGGTATCTTCTTCAGTGGAT 1532008
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
| ||| |||| | ||| | |||||||| ||||||||| | ||||| ||||| |
Sbjct 1532009 CGTTCGCATCTATCTTCTGGTTAAAGAAGCGTGGTCTCATGGCTGGTCTGACTTTCTCTA 1532068
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAAT 94972
|||| |||||||||||||||||||| || ||| || ||||| || ||| || |
Sbjct 1532069 ACGAACTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC-TTG--CCTTCTC---T 1532122
Query 94973 TATTGCGTATTAAACCAACGACTGAG--ACTATTCATTCTA-----TTGTTAAGGAAGCC 95025
| | | | || || || || | || | | | || | | ||| || ||
Sbjct 1532123 TCTCTCAT-TTGAAGCACCGCCCAAGCAAGCAAGCCGTCCAAGACGTCATTACCGAGGCT 1532181
Query 95026 GTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAAT 95085
|||||||||||| | | ||| | || || ||||| ||||| ||| |||| |||||
Sbjct 1532182 GTTGAGATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTGCGCACTCCTCGGCATGAAC 1532241
Query 95086 TCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAG-ATTGTTGAAGCAGATCGG 95144
|| | ||| |||| || |||| || ||||| | | ||| || ||
Sbjct 1532242 TCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTTGTTGC---TCTT 1532298
Query 95145 GGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTC 95202
|| | || | | || || || ||||| ||||||||||||||||| ||
Sbjct 1532299 GGCAACGAGAAGGTCTACAAGTCAGCCAACCCATTCGACTTCATGGAGAACATCTCACTT 1532358
Query 95203 GACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243
| ||| ||||| ||||||||||| ||| | ||||| |||||
Sbjct 1532359 GCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 1532399
>seq160
Length=1564179
Score = 109 bits (120), Expect = 6e-19
Identities = 223/323 (69%), Gaps = 10/323 (3%)
Strand=Plus/Minus
Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTG 9671
|| ||||||||||| ||||| | ||||||| || ||| | |||||| || | | |
Sbjct 1276133 AAGCCATCCATCTCCGTCAAGATCTGGTTAAGCGTAGCTTCTCTTTCATCGTTGCCACCG 1276074
Query 9672 GCATACCA-CCAGCACTGCGTTG---CTTTCCCACGGCATCAATCTCATCAATGAAGACG 9727
|| | | || || | | | |||||| | |||||||| ||||||||||||| |
Sbjct 1276073 CCAAATGAACCTGCCTTTCCACGAGCCTTTCCAATTGCATCAATTTCATCAATGAAGATG 1276014
Query 9728 ATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 9786
|| ||||| || | ||| | || | | |||||||| ||||| || || || ||
Sbjct 1276013 ATACATGGGGTGTTCTTC-CTTGCCATAGCGAAGAGATCTCGTACTCGGGAAGCACCAAC 1275955
Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGATT 9845
|||||||||||||||||| || | | | || ||| | || |||||| || | ||||
Sbjct 1275954 ACCAACAAACATCTCCACGAACTCGGAGCCGCTGACACT-GAAGAAGGGTACTTGGGATT 1275896
Query 9846 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 9905
| || ||| ||||| || | | || |||||||| ||||| || | || | |
Sbjct 1275895 CGCCAGCAGTGGCTTTCGCCAACAACGTTTTACCCGTTCCTGGAGGTCCGGAAAGAATAG 1275836
Query 9906 CACCTCGTGGAATCTTGGCGCCA 9928
|||||||||| ||||| || |||
Sbjct 1275835 CACCTCGTGGTATCTTAGCACCA 1275813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259305394200
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