Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq124 313 3e-80
>seq124
Length=198120
Score = 313 bits (346), Expect = 3e-80
Identities = 898/1366 (66%), Gaps = 54/1366 (4%)
Strand=Plus/Minus
Query 19165 CGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224
|||||||||| || ||||| |||||||| |||||| || || | || || | |||
Sbjct 126737 CGAGACATACAACTTGATGTCCCAGAAGTGCTTCACCCATGCTTCCCCAACTTTATTCGC 126678
Query 19225 CGCCGGTACGAACAACCCGCAGA--TGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
||||||||| || || ||| | | || || ||||| | | ||||| || ||
Sbjct 126677 CGCCGGTAC--ACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGGAT 126620
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
|||||||| || |||||||| || | ||| ||||| ||||||||| | ||
Sbjct 126619 AGCATTGACGGTATCTACGATACATTGAAGACTTGCGCCATGATCTCCAAGAATGCTGGT 126560
Query 19343 GGTATCGGGATCCACTGCTC---GAATATCCGGTCGAGTGGTACACGAATCAATGGGACG 19399
|| ||||| || | || || |||| || | | ||| | || || |||
Sbjct 126559 GGAATCGGTCTCAA-TGTTCACCGAATT--CGTGCTACCGGTGCCTACATTGCGGGAACG 126503
Query 19400 AACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTAC 19459
|||||| || |||||||||| || ||||| || |||||||||||||| ||||| |||
Sbjct 126502 AACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCAGATAC 126443
Query 19460 GTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGC 19517
||| |||| || ||| ||| | || | ||| |||||||||||||||||||||||||
Sbjct 126442 GTCGACCAAGGTGGCAACAAGAGACCAGGTGCT--TTCGCCATCTACCTCGAGCCATGGC 126385
Query 19518 ACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCT 19577
|||| || ||| | || | ||| || || || |||||| || | ||||| | ||
Sbjct 126384 ACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTCCGAG 126325
Query 19578 GTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGG 19637
||| || |||||| ||||||||||| || || || |||||| || |||||||||
Sbjct 126324 CTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAGAAGA 126265
Query 19638 ACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCG 19697
| | ||| ||| |||||||||| |||| ||||| ||| | | || ||||| || |
Sbjct 126264 ATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTATGGTG 126205
Query 19698 AGGCGTTCAATGAGTTGTACCGGACTTAC------GTAGCCCAGGGCCGGTTCAAGAAGG 19751
| | |||| | | | ||| || ||| | || | |||| || |||||
Sbjct 126204 ATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCG---CAAGA--- 126151
Query 19752 TGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACAC 19811
|| ||| | | | | ||| || | || | | ||| |||||| || | |
Sbjct 126150 CCATCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAATC 126091
Query 19812 CGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGA 19871
| | |||| ||||||||| || || ||| || ||||||||| ||||| | |
Sbjct 126090 CATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGCACAA 126031
Query 19872 -TCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCC 19930
|| | | |||||||| || ||||| || ||||| | || || ||| ||
Sbjct 126030 TTCGAAGC-TCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGTCGCT 125972
Query 19931 GTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTCAAGGCCTCC------TCCTT 19983
|| || || |||| ||||| ||| || || || | |||||| || | |||
Sbjct 125971 GTTTGCAACTTGGCTTCCCT-TGCTCTCCCCACCTACGTCAACACCAACGATGGTACCTA 125913
Query 19984 CGACTTTGCCAAATTGTACGAGGTGACCCGG---GTCGTCACGCGTAATCTGAATCGCGT 20040
||||||||| || | |||| || || | ||||||| | || ||||| |
Sbjct 125912 CGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAG---AACCTGAACAAGAT 125856
Query 20041 CATCGATCGGAACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCG 20097
||| ||| |||| ||||| ||||||| | ||| || | || |||||
Sbjct 125855 CATTGATGTCAACTACTACCCTGTCCCCGAGGCCAAG---AAGAGCAACTTCCGTCACCG 125799
Query 20098 GCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATT 20157
|| || || |||| ||||| || || || || | |||| || ||| |||| ||||
Sbjct 125798 ACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTTTCTTGGCTCTCCGCCTTCCATT 125739
Query 20158 CGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGC 20217
|||| ||| |||| | ||||||| ||||||||| || | |||||||| ||
Sbjct 125738 CGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCGC 125679
Query 20218 CCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTC 20277
||| || || || ||||| | |||| || |||||||| | | | || ||
Sbjct 125678 TCTCACTTCTTCAGTTGAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGGTTC 125619
Query 20278 GCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTG 20337
|||| ||| ||||| || ||| ||||||||||| |||||| | || | ||
Sbjct 125618 ACCCGTCTCCAAGGGTGAGCTTCAGTATGACATGTGGGGTGTCACTCCTACCGACCTCTG 125559
Query 20338 GAGC------GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGT 20391
| | || | ||| |||||||| ||||| |||||||| ||||||||
Sbjct 125558 GGACTGGGATACCTTGAAGCAGCAGATCAAGCAGCACGGTGTTCGCAACAGCTTGCTCGT 125499
Query 20392 CGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCC 20451
|| |||||||| || ||| ||| || || | || ||||||| ||||||||
Sbjct 125498 TGCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCGAGCC 125439
Query 20452 GTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497
||||| |||||||||||| |||||| || || ||||| |||
Sbjct 125438 ATACACATCCAACATCTACTCTCGTCGTGTTCTTGCTGGTGAATTC 125393
Score = 282 bits (312), Expect = 5e-71
Identities = 900/1380 (65%), Gaps = 42/1380 (3%)
Strand=Plus/Plus
Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593
||||||||||| ||||| |||||||| ||||||| || | || || |||
Sbjct 125420 GTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACT 125479
Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653
||| || |||||||| || || || | || |||| ||| ||| ||||||||
Sbjct 125480 GGCAGTTGGCATGGGAGCAACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTG 125539
Query 78654 CTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707
||| | | | |||||| | || | | | || ||||||||||| |||||
Sbjct 125540 CTTCAAGGTATCCCAGTCCCAGAGGTCGGTAGGAGTGACACCCCACATGTCATACTGAAG 125599
Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767
||||| ||| | || || || | | | |||||||| | ||| | ||||||| ||
Sbjct 125600 CTCACCCTTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAG 125659
Query 78768 TTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827
|| ||| || || |||||||| | | ||||||||| ||||||| |
Sbjct 125660 CTCAACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTG 125719
Query 78828 GCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887
|||| | |||||| | ||||| ||| || ||| |||| || || || ||
Sbjct 125720 CTTGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTG 125779
Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTA 78947
||| |||| ||| || |||||||| || | ||||||||| |||| | | |||||
Sbjct 125780 GACACCGACAGCAATAGGTCGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTA 125839
Query 78948 AAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACC-CGAGTCA--CCTCGTA 79004
|||| ||| |||| ||||||||| | ||||||| | | || | ||||
Sbjct 125840 GTAGTTGACATCAATGATCTTGTTCAGGTT---CTTGACGACAACCTGGCAGACTTCGTG 125896
Query 79005 CAATTTGGCGAAATCAAA------ATGATTTCCTTTGATGAAAGTCGGTAG-GCACAGCG 79057
| || || || || | || || |||| | | || || || ||| || |
Sbjct 125897 GAGCTTCGCAAAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCA-AGGG 125955
Query 79058 ATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACA 79117
| |||| |||||| || || ||| || || | | ||| | || || ||||| |
Sbjct 125956 AAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGA 126015
Query 79118 AATTAGACGACTTGA-TGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
|| || | | || | ||||||| |||||||||||||||||| || || || |||
Sbjct 126016 GGTTGGA-GCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCC 126074
Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236
|||||| |||| | || |||| ||||| ||| || | | | || ||| |
Sbjct 126075 TTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGT 126134
Query 79237 TCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGA-------CGTACGTCCGGTA 79289
| | | ||| || ||||| ||||||| ||| ||||| || |||
Sbjct 126135 TTCTGTGCCTTGATGG---TCTTG---CGACCCT-TGCCTTCACGCTCGTACTTCTCGTA 126187
Query 79290 CAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACAT 79349
| | | ||| | || ||||||||||| | || ||| |||||||||| ||||||||
Sbjct 126188 TAGAGCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACAT 126247
Query 79350 CAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGC 79409
|| ||| || | | ||||||||| || ||||||||| || |||||||||| |||
Sbjct 126248 CAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGC 126307
Query 79410 CGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAA 79469
|||||| || || || | ||||| | ||| |||||| || || || || |
Sbjct 126308 GTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTA 126367
Query 79470 GTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCC 79529
|| | || || |||||||| ||||| || ||||||||||| | ||| | ||||
Sbjct 126368 CTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTT 126427
Query 79530 GCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589
||| || |||| |||||| | ||| ||||||||||| || || |||||||| ||||| ||
Sbjct 126428 GCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACC 126487
Query 79590 GTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAG 79647
|| || | |||||||| || || | |||| | || ||||| | | || ||
Sbjct 126488 GTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGT-GAACA- 126545
Query 79648 TGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAG 79707
| || ||||| || || | ||||||||| ||||| ||| | || ||||||
Sbjct 126546 TTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAG 126605
Query 79708 ATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG 79767
|| || || || || || ||||| ||| |||||||| || | ||| | |||
Sbjct 126606 ATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGT-GCTTG 126664
Query 79768 T-TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAG 79826
| ||||||||| ||| | || || | || || |||||| |||| ||| |||||
Sbjct 126665 TGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAA 126724
Query 79827 ATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
| ||| ||||| || | | | || || ||||| || || || || || |||||
Sbjct 126725 GTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCAT 126784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523394405200
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