Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq124 313 3e-80 >seq124 Length=198120 Score = 313 bits (346), Expect = 3e-80 Identities = 898/1366 (66%), Gaps = 54/1366 (4%) Strand=Plus/Minus Query 19165 CGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224 |||||||||| || ||||| |||||||| |||||| || || | || || | ||| Sbjct 126737 CGAGACATACAACTTGATGTCCCAGAAGTGCTTCACCCATGCTTCCCCAACTTTATTCGC 126678 Query 19225 CGCCGGTACGAACAACCCGCAGA--TGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 ||||||||| || || ||| | | || || ||||| | | ||||| || || Sbjct 126677 CGCCGGTAC--ACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGGAT 126620 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 |||||||| || |||||||| || | ||| ||||| ||||||||| | || Sbjct 126619 AGCATTGACGGTATCTACGATACATTGAAGACTTGCGCCATGATCTCCAAGAATGCTGGT 126560 Query 19343 GGTATCGGGATCCACTGCTC---GAATATCCGGTCGAGTGGTACACGAATCAATGGGACG 19399 || ||||| || | || || |||| || | | ||| | || || ||| Sbjct 126559 GGAATCGGTCTCAA-TGTTCACCGAATT--CGTGCTACCGGTGCCTACATTGCGGGAACG 126503 Query 19400 AACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTAC 19459 |||||| || |||||||||| || ||||| || |||||||||||||| ||||| ||| Sbjct 126502 AACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCAGATAC 126443 Query 19460 GTCAACCAGGGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGC 19517 ||| |||| || ||| ||| | || | ||| ||||||||||||||||||||||||| Sbjct 126442 GTCGACCAAGGTGGCAACAAGAGACCAGGTGCT--TTCGCCATCTACCTCGAGCCATGGC 126385 Query 19518 ACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCT 19577 |||| || ||| | || | ||| || || || |||||| || | ||||| | || Sbjct 126384 ACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTCCGAG 126325 Query 19578 GTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGG 19637 ||| || |||||| ||||||||||| || || || |||||| || ||||||||| Sbjct 126324 CTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAGAAGA 126265 Query 19638 ACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCG 19697 | | ||| ||| |||||||||| |||| ||||| ||| | | || ||||| || | Sbjct 126264 ATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTATGGTG 126205 Query 19698 AGGCGTTCAATGAGTTGTACCGGACTTAC------GTAGCCCAGGGCCGGTTCAAGAAGG 19751 | | |||| | | | ||| || ||| | || | |||| || ||||| Sbjct 126204 ATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCG---CAAGA--- 126151 Query 19752 TGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACAC 19811 || ||| | | | | ||| || | || | | ||| |||||| || | | Sbjct 126150 CCATCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAATC 126091 Query 19812 CGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGA 19871 | | |||| ||||||||| || || ||| || ||||||||| ||||| | | Sbjct 126090 CATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGCACAA 126031 Query 19872 -TCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCC 19930 || | | |||||||| || ||||| || ||||| | || || ||| || Sbjct 126030 TTCGAAGC-TCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGTCGCT 125972 Query 19931 GTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTCAAGGCCTCC------TCCTT 19983 || || || |||| ||||| ||| || || || | |||||| || | ||| Sbjct 125971 GTTTGCAACTTGGCTTCCCT-TGCTCTCCCCACCTACGTCAACACCAACGATGGTACCTA 125913 Query 19984 CGACTTTGCCAAATTGTACGAGGTGACCCGG---GTCGTCACGCGTAATCTGAATCGCGT 20040 ||||||||| || | |||| || || | ||||||| | || ||||| | Sbjct 125912 CGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAG---AACCTGAACAAGAT 125856 Query 20041 CATCGATCGGAACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCG 20097 ||| ||| |||| ||||| ||||||| | ||| || | || ||||| Sbjct 125855 CATTGATGTCAACTACTACCCTGTCCCCGAGGCCAAG---AAGAGCAACTTCCGTCACCG 125799 Query 20098 GCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATT 20157 || || || |||| ||||| || || || || | |||| || ||| |||| |||| Sbjct 125798 ACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTTTCTTGGCTCTCCGCCTTCCATT 125739 Query 20158 CGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGC 20217 |||| ||| |||| | ||||||| ||||||||| || | |||||||| || Sbjct 125738 CGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCGC 125679 Query 20218 CCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTC 20277 ||| || || || ||||| | |||| || |||||||| | | | || || Sbjct 125678 TCTCACTTCTTCAGTTGAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGGTTC 125619 Query 20278 GCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTG 20337 |||| ||| ||||| || ||| ||||||||||| |||||| | || | || Sbjct 125618 ACCCGTCTCCAAGGGTGAGCTTCAGTATGACATGTGGGGTGTCACTCCTACCGACCTCTG 125559 Query 20338 GAGC------GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGT 20391 | | || | ||| |||||||| ||||| |||||||| |||||||| Sbjct 125558 GGACTGGGATACCTTGAAGCAGCAGATCAAGCAGCACGGTGTTCGCAACAGCTTGCTCGT 125499 Query 20392 CGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCC 20451 || |||||||| || ||| ||| || || | || ||||||| |||||||| Sbjct 125498 TGCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCGAGCC 125439 Query 20452 GTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 ||||| |||||||||||| |||||| || || ||||| ||| Sbjct 125438 ATACACATCCAACATCTACTCTCGTCGTGTTCTTGCTGGTGAATTC 125393 Score = 282 bits (312), Expect = 5e-71 Identities = 900/1380 (65%), Gaps = 42/1380 (3%) Strand=Plus/Plus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 ||||||||||| ||||| |||||||| ||||||| || | || || ||| Sbjct 125420 GTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACT 125479 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 ||| || |||||||| || || || | || |||| ||| ||| |||||||| Sbjct 125480 GGCAGTTGGCATGGGAGCAACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTG 125539 Query 78654 CTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| | | | |||||| | || | | | || ||||||||||| ||||| Sbjct 125540 CTTCAAGGTATCCCAGTCCCAGAGGTCGGTAGGAGTGACACCCCACATGTCATACTGAAG 125599 Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767 ||||| ||| | || || || | | | |||||||| | ||| | ||||||| || Sbjct 125600 CTCACCCTTGGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAG 125659 Query 78768 TTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827 || ||| || || |||||||| | | ||||||||| ||||||| | Sbjct 125660 CTCAACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTG 125719 Query 78828 GCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887 |||| | |||||| | ||||| ||| || ||| |||| || || || || Sbjct 125720 CTTGGCCTCAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTG 125779 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTA 78947 ||| |||| ||| || |||||||| || | ||||||||| |||| | | ||||| Sbjct 125780 GACACCGACAGCAATAGGTCGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTA 125839 Query 78948 AAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACC-CGAGTCA--CCTCGTA 79004 |||| ||| |||| ||||||||| | ||||||| | | || | |||| Sbjct 125840 GTAGTTGACATCAATGATCTTGTTCAGGTT---CTTGACGACAACCTGGCAGACTTCGTG 125896 Query 79005 CAATTTGGCGAAATCAAA------ATGATTTCCTTTGATGAAAGTCGGTAG-GCACAGCG 79057 | || || || || | || || |||| | | || || || ||| || | Sbjct 125897 GAGCTTCGCAAAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCA-AGGG 125955 Query 79058 ATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACA 79117 | |||| |||||| || || ||| || || | | ||| | || || ||||| | Sbjct 125956 AAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGA 126015 Query 79118 AATTAGACGACTTGA-TGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 || || | | || | ||||||| |||||||||||||||||| || || || ||| Sbjct 126016 GGTTGGA-GCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCC 126074 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236 |||||| |||| | || |||| ||||| ||| || | | | || ||| | Sbjct 126075 TTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGT 126134 Query 79237 TCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGA-------CGTACGTCCGGTA 79289 | | | ||| || ||||| ||||||| ||| ||||| || ||| Sbjct 126135 TTCTGTGCCTTGATGG---TCTTG---CGACCCT-TGCCTTCACGCTCGTACTTCTCGTA 126187 Query 79290 CAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACAT 79349 | | | ||| | || ||||||||||| | || ||| |||||||||| |||||||| Sbjct 126188 TAGAGCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACAT 126247 Query 79350 CAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGC 79409 || ||| || | | ||||||||| || ||||||||| || |||||||||| ||| Sbjct 126248 CAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGC 126307 Query 79410 CGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAA 79469 |||||| || || || | ||||| | ||| |||||| || || || || | Sbjct 126308 GTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTA 126367 Query 79470 GTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCC 79529 || | || || |||||||| ||||| || ||||||||||| | ||| | |||| Sbjct 126368 CTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTT 126427 Query 79530 GCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589 ||| || |||| |||||| | ||| ||||||||||| || || |||||||| ||||| || Sbjct 126428 GCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACC 126487 Query 79590 GTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAG 79647 || || | |||||||| || || | |||| | || ||||| | | || || Sbjct 126488 GTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGT-GAACA- 126545 Query 79648 TGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAG 79707 | || ||||| || || | ||||||||| ||||| ||| | || |||||| Sbjct 126546 TTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAG 126605 Query 79708 ATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG 79767 || || || || || || ||||| ||| |||||||| || | ||| | ||| Sbjct 126606 ATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGT-GCTTG 126664 Query 79768 T-TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAG 79826 | ||||||||| ||| | || || | || || |||||| |||| ||| ||||| Sbjct 126665 TGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAA 126724 Query 79827 ATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 | ||| ||||| || | | | || || ||||| || || || || || ||||| Sbjct 126725 GTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCAT 126784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523394405200