Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq124 196 5e-45 seq93 87.8 2e-12 >seq124 Length=198120 Score = 196 bits (216), Expect = 5e-45 Identities = 510/764 (67%), Gaps = 28/764 (4%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGA 53253 ||||| || || | ||||| |||||||| || | | || || | ||||| ||| | Sbjct 126784 ATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAGGC-TGCCATCGAGACATACAA 126726 Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 ||| ||| ||| |||| ||| || || || | ||||| | ||| ||| ||||| Sbjct 126725 CTTGATGTCCCAGAAGTGCTTCACCCATGCTTCCCCAACTTTATTCGCCGCCGGTACACC 126666 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 || | || | || |||||||| | | ||||| || || || ||||| || Sbjct 126665 ACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGGATAGCATTGACGGTAT 126606 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433 |||||| || | ||| || ||| ||||||||| | ||||| |||||| || | Sbjct 126605 CTACGATACATTGAAGACTTGCGCCATGATCTCCAAGAATGCTGGTGGAATCGGTCTCAA 126546 Query 53434 CTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 || || | || | ||||| | ||| | || ||| |||||||| | || | Sbjct 126545 -TGTTC-ACCGAATTCGTGCTACCGGTGCCTACATTGCGGGAACGAACGGAAACTCCAAC 126488 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||||| || ||||| || |||||||||||||| ||| | |||||| |||| ||||| Sbjct 126487 GGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCAGATACGTCGACCAAGGTGGC 126428 Query 53552 GGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||| | | ||| | | |||||||||||||||||||| |||||||| || | | || Sbjct 126427 AACAAGAGACCAGGTG-CTTTCGCCATCTACCTCGAGCCATGGCACGCAGATGTCTTCGA 126369 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TA 53669 || || || || || ||| || || | || || | || ||||| || || || Sbjct 126368 GTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTCCGAGCTCGTGATCTCTTCTA 126309 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 | || ||||||| || || ||||||||| | || |||||| | | |||||| Sbjct 126308 CGCCT-TGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAGAAGAATGGAGAGTGGACTT 126250 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT-------- 53781 |||||||||| ||||||||||| ||| | | |||||| ||||| ||||| Sbjct 126249 TGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTATGGTGATGAGTTCGAGGCTC 126190 Query 53782 TA-ACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840 || |||||| ||| || ||| | || |||| ||| |||| ||||||| | Sbjct 126189 TATACGAGAAGTA-CGAGCGT--GAAGGCAAGGGTCGC------AAGACCATCAAGGCAC 126139 Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900 | | ||| | | ||| | || ||| ||||| || | || | |||| || Sbjct 126138 AGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAATCCATTCATGCTCT 126079 Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 |||||||| | ||| |||||||||||||||||| ||||| Sbjct 126078 ACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGC 126035 >seq93 Length=1762202 Score = 87.8 bits (96), Expect = 2e-12 Identities = 193/285 (68%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 75009 TCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAAC 75068 ||||||| | |||| || | || ||||||||||| |||||||| ||| | | Sbjct 1531801 TCCTTGATGTATGTGTCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATG 1531742 Query 75069 GACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATG 75128 |||| | ||||||| | || ||||| | ||||| || || ||| | | Sbjct 1531741 ATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTCG 1531682 Query 75129 TCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATA 75188 | | ||||| ||||||| || || || |||||||| || || || || | ||| Sbjct 1531681 ACAAGGTTCTCGTTGACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATG 1531622 Query 75189 AAGTGGCGCTCATCGTCAGTGAG---TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCA 75245 |||| |||||||||||| |||| |||| ||| || | || ||| || || |||| Sbjct 1531621 AAGTAACGCTCATCGTCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTCGACAGATCA 1531562 Query 75246 ATCTCCTCGACCGTCCAGAAA-CTCCCAATC-GCCTTTTTGTACA 75288 ||||| || | ||||||||| | || || ||||| ||||||| Sbjct 1531561 ATCTCTTCTGCGGTCCAGAAAGATGCC--TCGGCCTTCTTGTACA 1531519 Score = 82.4 bits (90), Expect = 8e-11 Identities = 298/457 (65%), Gaps = 22/457 (5%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| || ||||| || || ||||||||||| || | | |||||||||||||| Sbjct 1532399 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCATG 1532340 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579 ||||||| ||||| || ||| | |||||| |||| | | ||| Sbjct 1532339 AAGTCGAATGGGTTGGCTGACTTGTAGAC---CTTCTCGTTGCCAAGAGCAACAAGGAGA 1532283 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 ||||| || || || | ||||| ||| |||| | | |||||||| |||| | Sbjct 1532282 CGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCG 1532223 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697 || || || |||||||| | ||||| ||| | ||| |||| | || | | | Sbjct 1532222 CAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCC--TCGGTAATGACGT 1532165 Query 74698 TGTGAATGTCTT---TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753 || | | ||| || |||| | | ||| |||||| | || | || | || Sbjct 1532164 CTTGGACGGCTTGCTTGCTTGGGCGGTGCT---TCAAATGAGAGAAGAGAAGGCAAG-CA 1532109 Query 74754 AACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAG 74811 || || | || || || || || | || | ||| || || || | || |||| Sbjct 1532108 AAGTC--GGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAG 1532051 Query 74812 GCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGC 74871 ||| || ||||||||||| ||||| ||||| | ||| || |||||||||||||| | Sbjct 1532050 CCATGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATAC 1531991 Query 74872 CTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 | |||||| || || ||||| || ||||| || || Sbjct 1531990 CCTCGACAGCGGCGAATGCGACGAGACGTTGAGCAAA 1531954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214597759000