Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq124 196 5e-45
seq93 87.8 2e-12
>seq124
Length=198120
Score = 196 bits (216), Expect = 5e-45
Identities = 510/764 (67%), Gaps = 28/764 (4%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGA 53253
||||| || || | ||||| |||||||| || | | || || | ||||| ||| |
Sbjct 126784 ATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAGGC-TGCCATCGAGACATACAA 126726
Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313
||| ||| ||| |||| ||| || || || | ||||| | ||| ||| |||||
Sbjct 126725 CTTGATGTCCCAGAAGTGCTTCACCCATGCTTCCCCAACTTTATTCGCCGCCGGTACACC 126666
Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373
|| | || | || |||||||| | | ||||| || || || ||||| ||
Sbjct 126665 ACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGGATAGCATTGACGGTAT 126606
Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433
|||||| || | ||| || ||| ||||||||| | ||||| |||||| || |
Sbjct 126605 CTACGATACATTGAAGACTTGCGCCATGATCTCCAAGAATGCTGGTGGAATCGGTCTCAA 126546
Query 53434 CTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
|| || | || | ||||| | ||| | || ||| |||||||| | || |
Sbjct 126545 -TGTTC-ACCGAATTCGTGCTACCGGTGCCTACATTGCGGGAACGAACGGAAACTCCAAC 126488
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| ||||| || ||||| || |||||||||||||| ||| | |||||| |||| |||||
Sbjct 126487 GGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCAGATACGTCGACCAAGGTGGC 126428
Query 53552 GGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
||| | | ||| | | |||||||||||||||||||| |||||||| || | | ||
Sbjct 126427 AACAAGAGACCAGGTG-CTTTCGCCATCTACCTCGAGCCATGGCACGCAGATGTCTTCGA 126369
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TA 53669
|| || || || || ||| || || | || || | || ||||| || || ||
Sbjct 126368 GTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTCCGAGCTCGTGATCTCTTCTA 126309
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729
| || ||||||| || || ||||||||| | || |||||| | | ||||||
Sbjct 126308 CGCCT-TGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAGAAGAATGGAGAGTGGACTT 126250
Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT-------- 53781
|||||||||| ||||||||||| ||| | | |||||| ||||| |||||
Sbjct 126249 TGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTATGGTGATGAGTTCGAGGCTC 126190
Query 53782 TA-ACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840
|| |||||| ||| || ||| | || |||| ||| |||| ||||||| |
Sbjct 126189 TATACGAGAAGTA-CGAGCGT--GAAGGCAAGGGTCGC------AAGACCATCAAGGCAC 126139
Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900
| | ||| | | ||| | || ||| ||||| || | || | |||| ||
Sbjct 126138 AGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAATCCATTCATGCTCT 126079
Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|||||||| | ||| |||||||||||||||||| |||||
Sbjct 126078 ACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGC 126035
>seq93
Length=1762202
Score = 87.8 bits (96), Expect = 2e-12
Identities = 193/285 (68%), Gaps = 7/285 (2%)
Strand=Plus/Minus
Query 75009 TCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAAC 75068
||||||| | |||| || | || ||||||||||| |||||||| ||| | |
Sbjct 1531801 TCCTTGATGTATGTGTCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATG 1531742
Query 75069 GACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATG 75128
|||| | ||||||| | || ||||| | ||||| || || ||| | |
Sbjct 1531741 ATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTCG 1531682
Query 75129 TCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATA 75188
| | ||||| ||||||| || || || |||||||| || || || || | |||
Sbjct 1531681 ACAAGGTTCTCGTTGACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATG 1531622
Query 75189 AAGTGGCGCTCATCGTCAGTGAG---TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCA 75245
|||| |||||||||||| |||| |||| ||| || | || ||| || || ||||
Sbjct 1531621 AAGTAACGCTCATCGTCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTCGACAGATCA 1531562
Query 75246 ATCTCCTCGACCGTCCAGAAA-CTCCCAATC-GCCTTTTTGTACA 75288
||||| || | ||||||||| | || || ||||| |||||||
Sbjct 1531561 ATCTCTTCTGCGGTCCAGAAAGATGCC--TCGGCCTTCTTGTACA 1531519
Score = 82.4 bits (90), Expect = 8e-11
Identities = 298/457 (65%), Gaps = 22/457 (5%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| ||||| || ||||| || || ||||||||||| || | | ||||||||||||||
Sbjct 1532399 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCATG 1532340
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGG 74579
||||||| ||||| || ||| | |||||| |||| | | |||
Sbjct 1532339 AAGTCGAATGGGTTGGCTGACTTGTAGAC---CTTCTCGTTGCCAAGAGCAACAAGGAGA 1532283
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
||||| || || || | ||||| ||| |||| | | |||||||| |||| |
Sbjct 1532282 CGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGTGCG 1532223
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697
|| || || |||||||| | ||||| ||| | ||| |||| | || | | |
Sbjct 1532222 CAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCC--TCGGTAATGACGT 1532165
Query 74698 TGTGAATGTCTT---TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753
|| | | ||| || |||| | | ||| |||||| | || | || | ||
Sbjct 1532164 CTTGGACGGCTTGCTTGCTTGGGCGGTGCT---TCAAATGAGAGAAGAGAAGGCAAG-CA 1532109
Query 74754 AACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAG 74811
|| || | || || || || || | || | ||| || || || | || ||||
Sbjct 1532108 AAGTC--GGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAG 1532051
Query 74812 GCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGC 74871
||| || ||||||||||| ||||| ||||| | ||| || |||||||||||||| |
Sbjct 1532050 CCATGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATAC 1531991
Query 74872 CTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
| |||||| || || ||||| || ||||| || ||
Sbjct 1531990 CCTCGACAGCGGCGAATGCGACGAGACGTTGAGCAAA 1531954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214597759000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |