Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq124 197 2e-45
seq93 168 8e-37
seq62 145 9e-30
seq99 125 8e-24
>seq124
Length=198120
Score = 197 bits (218), Expect = 2e-45
Identities = 573/867 (66%), Gaps = 25/867 (3%)
Strand=Plus/Plus
Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964
||||| |||| ||||| || || ||||| |||| | | |||| || || || |||
Sbjct 125952 AGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTG 126011
Query 80965 CACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022
|| | || || ||| |||||| || ||||| |||||||| ||| |||||||
Sbjct 126012 CAGAGGTTGGAG--CTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAG 126069
Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082
| ||||||||| |||| | || | || |||||| ||||| || | ||||| || ||
Sbjct 126070 CATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACC 126129
Query 81083 AAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142
||| | | ||||||| |||||| |||||||| | | ||||| ||||
Sbjct 126130 AAAGTTTCTGTGCCTTGATGGTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATA 126189
Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202
| ||||||| |||| | | |||| | | ||||||||||||| ||||||||||
Sbjct 126190 GAGCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCA 126249
Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262
||| || | ||||| ||| ||||||||| ||||||||||| | ||||
Sbjct 126250 AAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGT 126309
Query 81263 TGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320
||| || || || ||| || | ||||| | || ||||| || | || || |
Sbjct 126310 AGAAGAGATCACG--AGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTA 126367
Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC---- 81376
|| | || || || ||||||||||| || || | ||||| | | ||| | |
Sbjct 126368 CTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAG-CACCTGGTCTCTTGT 126426
Query 81377 GGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATAC 81436
|||||| |||| |||||| | |||||| ||| || ||||| | ||| || | |||||
Sbjct 126427 TGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATAC 126486
Query 81437 CATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGAT 81494
| | || | |||||||| ||| | || | || | || || | | || ||
Sbjct 126487 CGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACAT 126546
Query 81495 TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATA 81554
|| |||||||| ||||| | ||| || ||| || || |||| || || ||
Sbjct 126547 TG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTA 126604
Query 81555 AATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT 81614
|| || || |||||||| | ||||||||| | | ||| || || | | | |||
Sbjct 126605 GATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTT--GTGCT 126662
Query 81615 TTT--TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATC 81672
| | || ||||| ||| | ||||||| || || |||| | | ||||||
Sbjct 126663 TGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATC 126722
Query 81673 AGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731
| || || || || || | || | |||||| |||||||||||||| | ||| || ||
Sbjct 126723 AAGTTGTATGTCTCGATGGCAGCCT-CAATATCTTCACCGTGAATACCAACAGCCACTCG 126781
Query 81732 CATAAACATGTACTG-GGGCGTCTCGC 81757
||||| ||| | || ||||| |||||
Sbjct 126782 CATAATCATATGTTGTGGGCG-CTCGC 126807
>seq93
Length=1762202
Score = 168 bits (186), Expect = 8e-37
Identities = 178/232 (77%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| | || |||||||| || || | || || |||||
Sbjct 806339 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAAGTGGAGTCGTCA 806398
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || |||||||| |||||||| ||||| || ||||||
Sbjct 806399 GACACCATTGACAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCACCTGACCAG 806458
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| | || ||||||||||||||| | ||||||| ||||||| | ||| ||||| ||
Sbjct 806459 CAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACCTTGAGC-GACTACAA 806517
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
| |||||||| || ||||| ||| | || | ||||| || ||||| |||
Sbjct 806518 CATTCAAAAGGAGTCAACTCTCCATTTGGTGCTCCGTCTCCGTGGTGGTCAA 806569
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | ||||| ||||| || |||||||||||||| |||
Sbjct 806111 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTTGAATCATCC 806170
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || ||||| || |||||||| || || || || |||
Sbjct 806171 GACACAATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAG 806230
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || || || ||||||||| | ||||||| | ||||| ||||||| |||
Sbjct 806231 CAACGTCTTATCTTCGCCGGTAAGCAATTGGAGGATGGCAGAACCCTGTCAGACTACAAT 806290
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||||| || || | ||| | |||||||| |||||
Sbjct 806291 ATTCAGAAGGAGTCCACCCTGCACTTGGTCCTCCGTCTTCGTGGTGG 806337
Score = 140 bits (154), Expect = 4e-28
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475
|||||||||| || || || ||||| || || || ||||| || || || | ||| |
Sbjct 805893 TTGTCAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTAGAATCCTCCGACACCATCG 805952
Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535
|| | ||| | || || ||||||||||| || || ||||| ||||| || || || |
Sbjct 805953 ACAACGTTAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAACAACGCCTGA 806012
Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595
| || ||||| ||||||||||| |||| || ||||| | ||||| ||| |||| ||||
Sbjct 806013 TCTTCGCTGGCAAGCAACTCGAAGATGGACGAACCCTCTCCGACTACAATATCCAGAAGG 806072
Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || ||||| ||| | ||||| || || ||
Sbjct 806073 AGTCCACCCTCCATCTCGTCCTCCGTCTCCGTGGAGG 806109
Score = 136 bits (150), Expect = 5e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||||||||| | |||| ||| | ||| | |||
Sbjct 805624 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGATAATGTAAAGAGC 805683
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| ||||| || ||||| || || | || || ||||| |||
Sbjct 805684 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAACAACGCTTGATCTTCGCTGGAAAG 805743
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || || || | || || || | || |||||| |||| || || |||||||| |||
Sbjct 805744 CAGCTTGAAGACGGCCGCACTCTTTCGGATTATAATATCCAGAAAGAGTCCACTCTCCAT 805803
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | |||||||| || ||
Sbjct 805804 CTCGTCCTCCGTCTTCGTGGCGG 805826
>seq62
Length=1271336
Score = 145 bits (160), Expect = 9e-30
Identities = 143/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| ||||| |||||||| || ||||||||||| ||||| | |||| ||
Sbjct 898462 CTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACGAT 898403
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| || | ||| | || || ||||||||||||||||| || || ||||||||||| |
Sbjct 898402 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGATT 898343
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| |||||||| |||||||| ||||||| || ||||| | ||||| || | || ||
Sbjct 898342 GATCTTTGCTGGAAAGCAACTTGAGGATGGCCGCACCCTTTCGGACTACAACATTCAGAA 898283
Query 27594 GGAAT 27598
|| ||
Sbjct 898282 GGTAT 898278
Score = 84.2 bits (92), Expect = 2e-11
Identities = 199/301 (66%), Gaps = 0/301 (0%)
Strand=Plus/Minus
Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022
|| |||||||| ||| || || |||||||| |||| | ||||| || |||||
Sbjct 375933 CGTTCCATTCCCTCCGTCATTGATGGTTTCAAGCCTGGACAGAGAAAGGTCATGTACGCT 375874
Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCA 32082
|| ||||| |||||| | | || |||||||| | | || | || || || ||
Sbjct 375873 TGTTTCAAGCGCAACCTGACTCGAGATATGAAGGTCGTTGAATTGGCTGGTTATGTCTCA 375814
Query 32083 GAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCT 32142
|| | || ||||| || ||||| || || || | || || || | ||||||
Sbjct 375813 GAAAACACTGCCTACCATCACGGTGAAGCTTCTATGCACATGACTATCATTGGTCTTGCT 375754
Query 32143 CAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACC 32202
|||||||| || ||| | || || | || | | ||||| |||| || || |
Sbjct 375753 CAGAACTTCGTTGGTTCTAACAATGTCAATTGCTTAGAGCCTAGTGGATCTTTCGGTAGT 375694
Query 32203 CGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCT 32262
| || || || |||| |||||||| || | |||||||||||||| | || |||||
Sbjct 375693 AGACTTGCTGGAGGCAGCGATGCTGCTAGTCCTCGTTACATCTTCACTAGACTGTCACCT 375634
Query 32263 T 32263
|
Sbjct 375633 T 375633
>seq99
Length=1752785
Score = 125 bits (138), Expect = 8e-24
Identities = 141/186 (76%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| || || ||||||||||| || || ||||| ||||| | || | ||
Sbjct 456447 CTTCGTTAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACTAT 456506
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| || | ||| | || || ||||||||||| ||||| || || ||||| || || ||
Sbjct 456507 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAACAACGCCT 456566
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || ||||| |||||||||||||||| |||||||| ||| || || || ||||||
Sbjct 456567 GATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGAGC-GATTACAACATCCAAA 456625
Query 27593 AGGAAT 27598
||| ||
Sbjct 456626 AGGTAT 456631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308938579600
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