Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq124 197 2e-45 seq93 168 8e-37 seq62 145 9e-30 seq99 125 8e-24 >seq124 Length=198120 Score = 197 bits (218), Expect = 2e-45 Identities = 573/867 (66%), Gaps = 25/867 (3%) Strand=Plus/Plus Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 ||||| |||| ||||| || || ||||| |||| | | |||| || || || ||| Sbjct 125952 AGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTG 126011 Query 80965 CACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022 || | || || ||| |||||| || ||||| |||||||| ||| ||||||| Sbjct 126012 CAGAGGTTGGAG--CTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAG 126069 Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082 | ||||||||| |||| | || | || |||||| ||||| || | ||||| || || Sbjct 126070 CATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACC 126129 Query 81083 AAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAG 81142 ||| | | ||||||| |||||| |||||||| | | ||||| |||| Sbjct 126130 AAAGTTTCTGTGCCTTGATGGTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATA 126189 Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202 | ||||||| |||| | | |||| | | ||||||||||||| |||||||||| Sbjct 126190 GAGCCTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCA 126249 Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262 ||| || | ||||| ||| ||||||||| ||||||||||| | |||| Sbjct 126250 AAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGT 126309 Query 81263 TGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320 ||| || || || ||| || | ||||| | || ||||| || | || || | Sbjct 126310 AGAAGAGATCACG--AGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTA 126367 Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC---- 81376 || | || || || ||||||||||| || || | ||||| | | ||| | | Sbjct 126368 CTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAG-CACCTGGTCTCTTGT 126426 Query 81377 GGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATAC 81436 |||||| |||| |||||| | |||||| ||| || ||||| | ||| || | ||||| Sbjct 126427 TGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATAC 126486 Query 81437 CATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGAT 81494 | | || | |||||||| ||| | || | || | || || | | || || Sbjct 126487 CGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACAT 126546 Query 81495 TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATA 81554 || |||||||| ||||| | ||| || ||| || || |||| || || || Sbjct 126547 TG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTA 126604 Query 81555 AATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT 81614 || || || |||||||| | ||||||||| | | ||| || || | | | ||| Sbjct 126605 GATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTT--GTGCT 126662 Query 81615 TTT--TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATC 81672 | | || ||||| ||| | ||||||| || || |||| | | |||||| Sbjct 126663 TGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATC 126722 Query 81673 AGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATACCGATAGCTACACG 81731 | || || || || || | || | |||||| |||||||||||||| | ||| || || Sbjct 126723 AAGTTGTATGTCTCGATGGCAGCCT-CAATATCTTCACCGTGAATACCAACAGCCACTCG 126781 Query 81732 CATAAACATGTACTG-GGGCGTCTCGC 81757 ||||| ||| | || ||||| ||||| Sbjct 126782 CATAATCATATGTTGTGGGCG-CTCGC 126807 >seq93 Length=1762202 Score = 168 bits (186), Expect = 8e-37 Identities = 178/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || |||||||| || || | || || ||||| Sbjct 806339 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAAGTGGAGTCGTCA 806398 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| | || |||||||| |||||||| ||||| || |||||| Sbjct 806399 GACACCATTGACAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCACCTGACCAG 806458 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | || ||||||||||||||| | ||||||| ||||||| | ||| ||||| || Sbjct 806459 CAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACCTTGAGC-GACTACAA 806517 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | |||||||| || ||||| ||| | || | ||||| || ||||| ||| Sbjct 806518 CATTCAAAAGGAGTCAACTCTCCATTTGGTGCTCCGTCTCCGTGGTGGTCAA 806569 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||| ||||| || |||||||||||||| ||| Sbjct 806111 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTTGAATCATCC 806170 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || ||||| || |||||||| || || || || ||| Sbjct 806171 GACACAATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAG 806230 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || ||||||||| | ||||||| | ||||| ||||||| ||| Sbjct 806231 CAACGTCTTATCTTCGCCGGTAAGCAATTGGAGGATGGCAGAACCCTGTCAGACTACAAT 806290 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || || | ||| | |||||||| ||||| Sbjct 806291 ATTCAGAAGGAGTCCACCCTGCACTTGGTCCTCCGTCTTCGTGGTGG 806337 Score = 140 bits (154), Expect = 4e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475 |||||||||| || || || ||||| || || || ||||| || || || | ||| | Sbjct 805893 TTGTCAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTAGAATCCTCCGACACCATCG 805952 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 || | ||| | || || ||||||||||| || || ||||| ||||| || || || | Sbjct 805953 ACAACGTTAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAACAACGCCTGA 806012 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | || ||||| ||||||||||| |||| || ||||| | ||||| ||| |||| |||| Sbjct 806013 TCTTCGCTGGCAAGCAACTCGAAGATGGACGAACCCTCTCCGACTACAATATCCAGAAGG 806072 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||||| ||| | ||||| || || || Sbjct 806073 AGTCCACCCTCCATCTCGTCCTCCGTCTCCGTGGAGG 806109 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||||||||| | |||| ||| | ||| | ||| Sbjct 805624 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGATAATGTAAAGAGC 805683 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| ||||| || ||||| || || | || || ||||| ||| Sbjct 805684 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAACAACGCTTGATCTTCGCTGGAAAG 805743 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || || | || || || | || |||||| |||| || || |||||||| ||| Sbjct 805744 CAGCTTGAAGACGGCCGCACTCTTTCGGATTATAATATCCAGAAAGAGTCCACTCTCCAT 805803 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | |||||||| || || Sbjct 805804 CTCGTCCTCCGTCTTCGTGGCGG 805826 >seq62 Length=1271336 Score = 145 bits (160), Expect = 9e-30 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| ||||| |||||||| || ||||||||||| ||||| | |||| || Sbjct 898462 CTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACGAT 898403 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| | || || ||||||||||||||||| || || ||||||||||| | Sbjct 898402 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGATT 898343 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| |||||||| ||||||| || ||||| | ||||| || | || || Sbjct 898342 GATCTTTGCTGGAAAGCAACTTGAGGATGGCCGCACCCTTTCGGACTACAACATTCAGAA 898283 Query 27594 GGAAT 27598 || || Sbjct 898282 GGTAT 898278 Score = 84.2 bits (92), Expect = 2e-11 Identities = 199/301 (66%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022 || |||||||| ||| || || |||||||| |||| | ||||| || ||||| Sbjct 375933 CGTTCCATTCCCTCCGTCATTGATGGTTTCAAGCCTGGACAGAGAAAGGTCATGTACGCT 375874 Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCA 32082 || ||||| |||||| | | || |||||||| | | || | || || || || Sbjct 375873 TGTTTCAAGCGCAACCTGACTCGAGATATGAAGGTCGTTGAATTGGCTGGTTATGTCTCA 375814 Query 32083 GAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCT 32142 || | || ||||| || ||||| || || || | || || || | |||||| Sbjct 375813 GAAAACACTGCCTACCATCACGGTGAAGCTTCTATGCACATGACTATCATTGGTCTTGCT 375754 Query 32143 CAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACC 32202 |||||||| || ||| | || || | || | | ||||| |||| || || | Sbjct 375753 CAGAACTTCGTTGGTTCTAACAATGTCAATTGCTTAGAGCCTAGTGGATCTTTCGGTAGT 375694 Query 32203 CGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCT 32262 | || || || |||| |||||||| || | |||||||||||||| | || ||||| Sbjct 375693 AGACTTGCTGGAGGCAGCGATGCTGCTAGTCCTCGTTACATCTTCACTAGACTGTCACCT 375634 Query 32263 T 32263 | Sbjct 375633 T 375633 >seq99 Length=1752785 Score = 125 bits (138), Expect = 8e-24 Identities = 141/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || ||||||||||| || || ||||| ||||| | || | || Sbjct 456447 CTTCGTTAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACTAT 456506 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| | || || ||||||||||| ||||| || || ||||| || || || Sbjct 456507 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAACAACGCCT 456566 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || ||||| |||||||||||||||| |||||||| ||| || || || |||||| Sbjct 456567 GATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGAGC-GATTACAACATCCAAA 456625 Query 27593 AGGAAT 27598 ||| || Sbjct 456626 AGGTAT 456631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308938579600