Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq93 136 3e-27
seq99 84.2 2e-11
>seq93
Length=1762202
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||| ||| | || |||||||| || ||| | |||
Sbjct 806111 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTTGAATCATCC 806170
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || |||||||| || || || || |||||||||||
Sbjct 806171 GACACAATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAG 806230
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | |||||| || |||||||| || | ||| | || || |||||
Sbjct 806231 CAACGTCTTATCTTCGCCGGTAAGCAATTGGAGGATGGCAGAACCCTGTCAGACTACAAT 806290
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || ||||| | ||| | || ||||||||
Sbjct 806291 ATTCAGAAGGAGTCCACCCTGCACTTGGTCCTCCGTCTTCGTGGTGGCAT 806340
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||| |||| |||||| | || || | |||||||| ||||
Sbjct 806338 CATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAAGTGGAGTCGTC 806397
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | ||||| ||| ||||| || || || || || ||||| || ||
Sbjct 806398 AGACACCATTGACAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCACCTGACCA 806457
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| || || | || || || |||||||| || || ||| | ||| |||||
Sbjct 806458 GCAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACCTTGAGCGACTACAA 806517
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||||||| || | |||||||| | ||| | || |||||
Sbjct 806518 CATTCAAAAGGAGTCAACTCTCCATTTGGTGCTCCGTCTCCGTGGTGG 806565
>seq99
Length=1752785
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || |||||| |||| || || || ||||| || |||| | ||
Sbjct 456448 TTCGTTAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACTATC 456507
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || || ||||| ||||| || |||||||| ||||| || |
Sbjct 456508 GACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAACAACGCCTG 456567
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||| ||||| ||| | || || | ||| | |||||||||||| ||||||
Sbjct 456568 ATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGAGCGATTACAACATCCAAAAG 456627
Query 27177 G 27177
|
Sbjct 456628 G 456628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917285521600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |