Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq124 190 3e-43
>seq124
Length=198120
Score = 190 bits (210), Expect = 3e-43
Identities = 517/779 (66%), Gaps = 18/779 (2%)
Strand=Plus/Plus
Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAAC 77819
|| ||||| || || | |||||||||||| ||||||| | ||||| || || || ||
Sbjct 126030 ATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAAT 126089
Query 77820 GGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTAT 77878
||| |||| || || |||||| || | || || | ||| | | ||| || || ||
Sbjct 126090 GGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAA-GTTTCTGTGCCTTGAT 126148
Query 77879 CATAGATTTGTATC---GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCA 77933
| || | | |||| || | || || | ||||| |||| || || |||
Sbjct 126149 GGTC--TTGCGACCCTTGCCT-TCACGCTCGTACTTCTCGTATAGAGCC--TCGAACTCA 126203
Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993
|| || | |||||| |||| || ||||| || || ||||||||||| | ||| || |||
Sbjct 126204 TCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCA 126263
Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053
| | || ||| || ||||| ||||||||||| ||||| | || || ||||| ||
Sbjct 126264 TTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGA 126323
Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113
| || ||| || || || |||||| ||||| || |||| | | ||| |
Sbjct 126324 GCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCG 126383
Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173
|||||||| || || || || || | | | || |||| || || || || || || |
Sbjct 126384 TGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACG 126443
Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233
|||||||| ||||| || | || | | ||| |||| |||||||| || |||| ||
Sbjct 126444 TATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTC 126503
Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTC 78291
||||| | ||| || || | || ||||| | || || | || ||||| |
Sbjct 126504 GTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGA--CCGATTCCAC 126561
Query 78292 CTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGT 78351
| || |||| || || | |||||| |||||||||||||||||||| || || || |
Sbjct 126562 CAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTAT 126621
Query 78352 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 78411
| || |||||| | ||| || || ||| | ||| || || || || |
Sbjct 126622 CCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGA 126681
Query 78412 ATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAG 78471
|||| || || || ||||| || || || || | || | | |||||||| || || |
Sbjct 126682 ATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGG 126741
Query 78472 CTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529
| | || || || || | ||||| || || || || ||||| | |||||| || ||
Sbjct 126742 CAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACTCGCATAATCATATGTTGTGG 126799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667019911200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |