Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq124 178 2e-39
seq93 122 1e-22
>seq124
Length=198120
Score = 178 bits (196), Expect = 2e-39
Identities = 416/624 (67%), Gaps = 4/624 (1%)
Strand=Plus/Plus
Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567
||||| | || || || ||||| || | |||||| |||| || || || || || ||
Sbjct 126185 GTATAGAGCC--TCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGG 126242
Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627
|||||||| | |||||| |||| | || ||| || ||||| ||||||||||| |||||
Sbjct 126243 CACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCAC 126302
Query 76628 AGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCT 76687
| || || ||||| || | || ||| || || || |||||| |||||
Sbjct 126303 AAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCA 126362
Query 76688 AGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGT 76747
||| |||| | | ||| | |||||||| || || || || || | | |||| ||||
Sbjct 126363 AGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTC 126422
Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807
|| || || || || || | |||||||||||||| || | || | | ||| ||||
Sbjct 126423 TTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACG 126482
Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867
|| ||||| || | || || ||||| | ||| || || |||||||| |
Sbjct 126483 ATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGA 126542
Query 76868 ATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCA 76927
| | || || ||||| || || | || ||||| | || || |||||||| ||
Sbjct 126543 ACATTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCG 126602
Query 76928 TAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 76987
||||| || || || ||||| || |||||| | ||| || || ||| | |||
Sbjct 126603 TAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCT 126662
Query 76988 TGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGT 77047
|| || || || || || || || || ||||| ||||| || || | || |
Sbjct 126663 TGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATC 126722
Query 77048 AGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACG 77106
| |||||||| || || | || || ||||| || | ||||| || ||||| || ||
Sbjct 126723 AAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACTCG 126781
Query 77107 CATCAACATATGCTGAGGTCGTTC 77130
||| | |||||| || || || ||
Sbjct 126782 CATAATCATATGTTGTGGGCGCTC 126805
>seq93
Length=1762202
Score = 122 bits (134), Expect = 1e-22
Identities = 297/444 (67%), Gaps = 6/444 (1%)
Strand=Plus/Minus
Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397
||||||||| ||||| ||||| |||||||| || || || || || | | ||| || ||
Sbjct 1532406 TTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTT 1532347
Query 46398 TTCCATAAAATCAAACGGATTAG-TAACATTATAAAtttttttAAATCCTAATTCTGAAA 46456
||||| || || || || || | | || || || | || | || | | ||
Sbjct 1532346 CTCCATGAAGTCGAATGGGTTGGCTGAC-TTGTAGACCTTCTCGTTGCCAAGAGCAACAA 1532288
Query 46457 TCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGA 46516
|| | ||| |||||||| || || || ||||| | | | ||||| || | ||
Sbjct 1532287 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGA 1532228
Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576
|| | || |||||||| || | ||||| || ||||| ||||| || | || |
Sbjct 1532227 GTGCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168
Query 46577 TCGATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634
|| | || || | || || ||||| | ||| ||||||| || | | || ||
Sbjct 1532167 -CG-TCTTGGACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGC 1532110
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
||| || ||||| || || || | | || | ||||||||| || || || ||||
Sbjct 1532109 AAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGC 1532050
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754
||| || |||||||| || | ||| || |||| ||||| |||||| ||||| || ||
Sbjct 1532049 CATGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACC 1531990
Query 46755 TTCTACAGCCGCGAATGCGACAAG 46778
|| ||||| ||||||||||| ||
Sbjct 1531989 CTCGACAGCGGCGAATGCGACGAG 1531966
Score = 95.1 bits (104), Expect = 2e-14
Identities = 194/285 (68%), Gaps = 5/285 (2%)
Strand=Plus/Minus
Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959
||||| || || | ||| ||| | || ||||||||||| || || ||||| ||
Sbjct 1531792 TATGTGTCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATGATCTGGAAG 1531733
Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATT 47018
||||| || || | || || | ||||| || || || ||| || || ||||| ||
Sbjct 1531732 CCGTAGAAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTC-GACAAGGTT 1531674
Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTT 47078
||| || || |||||||| ||| || || ||||| | || ||| || || ||
Sbjct 1531673 CTCGTTGACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATGAAGTAACG 1531614
Query 47079 TTCATCGGTAGTCAG---TTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135
|||||| | | || || |||||||| | || ||| || || | ||| | |||||
Sbjct 1531613 CTCATCGTCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCTTC 1531554
Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180
|| |||||||| || ||||| || || || ||||| | ||| ||
Sbjct 1531553 TGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 1531509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932573105600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |