Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6 105 7e-18 >seq6 Length=3486194 Score = 105 bits (116), Expect = 7e-18 Identities = 322/489 (66%), Gaps = 8/489 (2%) Strand=Plus/Minus Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 || || ||||| || || || |||||||| | | | ||||||| || | | || || Sbjct 2268865 TCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGAGTTCATGCCCAGCAAACCGACA 2268806 Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA 16918 || || ||||| || | ||| || || ||| | || ||||| | || | | | || Sbjct 2268805 GGGAGCGCTTCAGTTAGAAACTCTTTTTCAATAGCGACTGCTTCGATGATGACATTCTCA 2268746 Query 16919 ACTCGTTCCTCGGACGGTGTA-TGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 | | | | || ||| | || || ||||||| | | || ||||| ||||| Sbjct 2268745 ATGAGCTT-TGGGTCGGGCTTGTGCTTGAGATGTTGCAGGAGGAGGCATGCAAAATCTGT 2268687 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 || | ||||| || | ||| ||||| || ||||| || | || |||||| || Sbjct 2268686 GTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCAGGCATCAGGCC 2268627 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 |||| | ||| || ||||| || || || ||||||||||| ||||||||||||| Sbjct 2268626 CTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATACCCTCGACGGC 2268567 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCAC 17157 ||| || || | | ||||| ||| | || | || || | | |||||| | | | Sbjct 2268566 TGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAGATCCATCTAAGAGC 2268507 Query 17158 CCACTCGG-CTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCT 17215 ||| |||| ||| |||| |||||| || || || || || | || | | ||| Sbjct 2268506 CCAGTCGGCCTTCTTGC-GGATGCAAGGGATGGTGTCGATAGCATCGAACAGGTAGGTCT 2268448 Query 17216 TTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTAT 17274 | | || | || ||| | | || || |||||||| || ||||| |||||||| || Sbjct 2268447 TCT--CTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATCTCGGAGTGGAT 2268390 Query 17275 GTTCTCCAT 17283 ||||||||| Sbjct 2268389 GTTCTCCAT 2268381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545515898840