Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 7e-18
>seq6
Length=3486194
Score = 105 bits (116), Expect = 7e-18
Identities = 322/489 (66%), Gaps = 8/489 (2%)
Strand=Plus/Minus
Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858
|| || ||||| || || || |||||||| | | | ||||||| || | | || ||
Sbjct 2268865 TCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGAGTTCATGCCCAGCAAACCGACA 2268806
Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA 16918
|| || ||||| || | ||| || || ||| | || ||||| | || | | | ||
Sbjct 2268805 GGGAGCGCTTCAGTTAGAAACTCTTTTTCAATAGCGACTGCTTCGATGATGACATTCTCA 2268746
Query 16919 ACTCGTTCCTCGGACGGTGTA-TGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977
| | | | || ||| | || || ||||||| | | || ||||| |||||
Sbjct 2268745 ATGAGCTT-TGGGTCGGGCTTGTGCTTGAGATGTTGCAGGAGGAGGCATGCAAAATCTGT 2268687
Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037
|| | ||||| || | ||| ||||| || ||||| || | || |||||| ||
Sbjct 2268686 GTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCAGGCATCAGGCC 2268627
Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097
|||| | ||| || ||||| || || || ||||||||||| |||||||||||||
Sbjct 2268626 CTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATACCCTCGACGGC 2268567
Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCAC 17157
||| || || | | ||||| ||| | || | || || | | |||||| | | |
Sbjct 2268566 TGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAGATCCATCTAAGAGC 2268507
Query 17158 CCACTCGG-CTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCT 17215
||| |||| ||| |||| |||||| || || || || || | || | | |||
Sbjct 2268506 CCAGTCGGCCTTCTTGC-GGATGCAAGGGATGGTGTCGATAGCATCGAACAGGTAGGTCT 2268448
Query 17216 TTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTAT 17274
| | || | || ||| | | || || |||||||| || ||||| |||||||| ||
Sbjct 2268447 TCT--CTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATCTCGGAGTGGAT 2268390
Query 17275 GTTCTCCAT 17283
|||||||||
Sbjct 2268389 GTTCTCCAT 2268381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545515898840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |