Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 2e-29
seq1 91.5 1e-13
>seq5
Length=3889323
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||| |||||||||||||| ||||| || || ||||| |||||||||||||||
Sbjct 1367030 CCGCCACGCAGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 1366971
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| |||| || | ||||||||| ||||| || | | |||||||||| ||
Sbjct 1366970 AGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGG 1366911
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | || | || ||
Sbjct 1366910 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTCTCAACT 1366851
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||| |||||||| | || || || |||||||||||
Sbjct 1366850 TCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||||||||| || ||| ||| |||| || | ||||||||| |||||
Sbjct 1366767 TTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 1366708
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | |||||||||||| || | | ||||||||| || || ||| | |
Sbjct 1366707 GATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGAATTTTCGACTTGACGTT 1366648
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | |||||||| || | |||||| || ||||| ||||| || |||||
Sbjct 1366647 GTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTGCCCGTGAGGGTCTTCAC 1366588
Query 34378 AAAGATCTGCAT 34389
||||| |||||
Sbjct 1366587 GAAGATTTGCAT 1366576
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
||||| || || ||||||||||| || ||| |||| || | ||||| || || ||
Sbjct 1366538 TCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAAG 1366479
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| || ||||| ||| || | || ||||||||| ||||| ||| | | |
Sbjct 1366478 ATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTG 1366419
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | |||| |||| ||||| || | |||||||| |||||||||||||| || ||
Sbjct 1366418 TCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 1366359
Query 34379 AAGATCTGCAT 34389
||||| |||||
Sbjct 1366358 AAGATTTGCAT 1366348
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| |||||||| ||| ||| ||| | || || | ||| || || |||||
Sbjct 1366310 TCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAG 1366251
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| |||||||| || || | || |||||||| ||||| ||| | || |
Sbjct 1366250 ATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTG 1366191
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| |||| || || || | ||||| || ||||||||||| || || ||
Sbjct 1366190 TCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACG 1366131
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 1366130 AAGATCTGCAT 1366120
>seq1
Length=6061779
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
|| || || ||||||||| || | |||| |||| || | |||||||| ||||| ||
Sbjct 4126221 TTTTGGATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 4126280
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| |||||||||||| || | || ||||||||| ||||| || | || | |
Sbjct 4126281 AGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 4126340
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | || | |||||||| || | |||||||| ||||| ||||| || || || |||
Sbjct 4126341 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 4126400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071948813280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |