Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 114 3e-20 >seq4 Length=4310093 Score = 114 bits (126), Expect = 3e-20 Identities = 408/626 (65%), Gaps = 19/626 (3%) Strand=Plus/Plus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||||| || || || | ||| | | ||||| |||||| ||| ||||||| Sbjct 3510592 GCCATTGTCTACGACAGGGACTTCAACTACCAATACTTTGGTTTCAAGACGTTGGAGAAG 3510651 Query 248851 TCGTATCTCCTCAAAATTGATG-GCAAGATCGTGGAACGAATTCAGCACATGTTGATGCG 248909 || || || || ||||| | ||||| ||| |||||| ||||||||| | ||||| Sbjct 3510652 TCATACCTGCTGAAAATCGGCAAGCAAG-TCGCCGAACGACCACAGCACATGATTATGCG 3510710 Query 248910 AGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAAT 248969 |||||||| || || ||| || || || |||| | ||||| |||| | || Sbjct 3510711 TGTGGCTGTTGGTATCCACGGTGACGATATTGAGAAGACCATTGAGACATACAACCTTAT 3510770 Query 248970 GAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACA 249028 | | || | || ||||| |||| ||||||||||| ||||| || | || | Sbjct 3510771 GTCCCAGAAGTGCTTTACTCATGCGTCACCCACGCTCTTCAATGCCGGAACACCACAGC- 3510829 Query 249029 ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATG 249088 |||||| ||| ||||| | | | |||| | || || |||| ||||| |||| Sbjct 3510830 CCCAGCTGTCCTCCTGCTTCTTGATCGACATGAAGGATGATAGCATCGAGGGCATCTATG 3510889 Query 249089 ACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCG 249145 |||| || | |||| || | ||| || || ||| || || ||||||||| | Sbjct 3510890 ACACACTCA---AGACCTGTGCCATGATCTCCAAGACCGCTGGTGGCATCGGTCTCAATG 3510946 Query 249146 TCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGG--GGTCAGTGATGG 249203 | | |||||| || | || || ||||| ||| || ||||| ||| |||| Sbjct 3510947 CCCACTGCATCCGTGCAACTGGCTCCTACATTGCAGGAACTAATGGAACATCA--AATGG 3511004 Query 249204 TATCGTACCCCTCCTTCGATGCTTT-GAGTCCACCGCCAGGTTCATCAACCAGGCCGGGC 249262 || | || | | || || ||| | || ||| | | | || |||||| ||| Sbjct 3511005 GCTCATTCCTATGTTGCG-TGTTTTCAACAATACGGCCCGCTACGTCGACCAGGGCGGCA 3511063 Query 249263 GC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGT 249319 | ||| || | || ||||| || |||| |||||||| ||| | || || | Sbjct 3511064 ACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTTGACT 3511123 Query 249320 TCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACG 249379 || || | | | ||||||| ||||||| || | | || |||||||| ||||| | Sbjct 3511124 TCTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGACCTGTTCTATG 3511183 Query 249380 GCCTGTGGGTCTCCGACTTGTTCATG 249405 ||||| | | |||||||||||| Sbjct 3511184 CTATGTGGACCCCTGACTTGTTCATG 3511209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766221150784