Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 342 5e-89
seq6 138 1e-27
seq5 118 9e-22
seq1 93.3 4e-14
>seq4
Length=4310093
Score = 342 bits (378), Expect = 5e-89
Identities = 1228/1902 (65%), Gaps = 51/1902 (3%)
Strand=Plus/Minus
Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
||||| || || || ||||| |||| | || || | ||||||| || || ||||||
Sbjct 3512459 TCTTGGTCGACAGTGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATG 3512400
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| || || |||||||| ||||| || ||| || || || || | ||| || |
Sbjct 3512399 CCAGTTTTGAGACCCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCATGGTG 3512340
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| | || || | || || || || ||| ||||| || || || ||||||||
Sbjct 3512339 GGTTCTTTCAAGTGGATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCC 3512280
Query 22283 GCCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340
||||| | | | || || | | | |||||||| || |||||||||||| | |||
Sbjct 3512279 GCCATCTGGAGGATAGTTCG--TTGGCTGATTTCCCAGACAGTCTTGTACAGTGCCTTGA 3512222
Query 22341 TCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT 22400
| || || || ||| |||| || || || | | ||||| || |
Sbjct 3512221 TGTCGGCAGGGATGTTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCT 3512162
Query 22401 TAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCA 22460
| || |||| ||| | ||| | || || ||| || | || |||| || |
Sbjct 3512161 TCATGTTATCTGACCAGAGACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGA 3512102
Query 22461 CTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAG 22520
| || ||||| || | || ||| || || ||| |||||||| || | || || ||
Sbjct 3512101 CCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGC 3512042
Query 22521 ATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCG 22580
|||| ||||| || || ||||| | ||| || ||||| ||||| || || | || || |
Sbjct 3512041 ATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAG 3511982
Query 22581 AGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAGATC 22638
|||| | | || | ||| | ||| | ||| | | || |||||||||||| ||
Sbjct 3511981 AGTTGCGAACACCATACTTGGCAATGTCGGCCTTCAAAGAGTC--CCAGTCCCACAGGTC 3511924
Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTCGCCGGGC 22694
|| || || ||||| |||||| || || || | || ||| | |||| ||||
Sbjct 3511923 AGATGGGGTGACATT---CCACATGTCATACTGGAGCATGCCTTGTGAGACT----GGGC 3511871
Query 22695 TGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACG 22754
|||| |||||||| || || | || | | ||||| ||||| || | |
Sbjct 3511870 TGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAG 3511811
Query 22755 CGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC----GGCGGCGGCGACGCTT 22810
| | | || || ||||| ||||| | |||| | || | | ||| ||
Sbjct 3511810 CCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTGTCGAGCCTCCGGAGAG---- 3511755
Query 22811 TCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATC 22870
|| | || | ||||| | ||| || || || | ||| ||||| || | || ||
Sbjct 3511754 TCAAAGGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATA 3511695
Query 22871 GGTCGGTTTTTCAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGA 22928
||||| | || ||| || ||| | ||||| || | ||||| | || ||||
Sbjct 3511694 GGTCGATGGCGCATATT--ACTCTTCTTCGCCTCAGGGACGGGATAGTAGTTGATGTCGA 3511637
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| || ||||||| || | || || | || || | | ||||| |
Sbjct 3511636 TGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCAT 3511577
Query 22989 AAACGCCC---GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGG 23045
| |||| ||||| | || || || | ||| | || || | |||||| || |
Sbjct 3511576 ACTCGCCACGAGATTGGTCGACGAAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGACAG 3511517
Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT--AT 23103
| ||||||||| | ||| |||| || || ||||| || ||||| | ||| ||
Sbjct 3511516 CAACCTCGTCTGGCGCAGTGAACTCGACGATCTCGGTGCAAAGATT--TGAGCTTCGAAT 3511459
Query 23104 CGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGG 23163
|||||||| || |||||||||| || | ||||| | |||||||||||||||||| ||
Sbjct 3511458 GGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGG 3511399
Query 23164 CGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACG 23223
|| || |||||| ||| | ||| | ||||| ||||| |||| || | || |
Sbjct 3511398 AGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCTTGACG-G 3511340
Query 23224 TCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282
|| ||| | | ||| || | || || | | ||| | | | | ||| || | ||||
Sbjct 3511339 TCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGT 3511280
Query 23283 A-ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATT 23340
| ||| || ||||| || || | || ||| || || | ||| |||| || ||
Sbjct 3511279 AGACA-TCAGCCAGTCCTGGTGCTT-CATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTT 3511222
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| || || ||| || | || || |||| | ||| |||||||| || ||||| ||
Sbjct 3511221 CTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACG 3511162
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
|| || || |||||| ||||||| | | || ||| ||||| || || || || |||||
Sbjct 3511161 GACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCA 3511102
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
||||| ||||| | |||||| || || |||| ||| ||||||||||| |||||||| ||
Sbjct 3511101 TGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCG 3511042
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|||||| |||||| | || | | ||| || | ||| || || || | || ||
Sbjct 3511041 GGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCC 3510982
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | || || |||| || | | ||| | | || ||| ||||| || | |
Sbjct 3510981 TGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGT 3510922
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || || || || ||||| ||||||||||||||||| || || ||
Sbjct 3510921 CTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTT 3510862
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| ||| |||||| || || |||| || | | || || |||| ||| || ||
Sbjct 3510861 CATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGT 3510802
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| || || |||||| | | ||||| || ||||| || || |||| ||
Sbjct 3510801 GGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTC 3510742
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
||| || || ||||| ||||| | || || ||||| ||||||| || |||| ||| |
Sbjct 3510741 AATATCGTCACCGTGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGC 3510682
Query 23881 --CGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| || |||| ||||| | ||| ||||| | || ||| || || ||||| ||
Sbjct 3510681 GACTTGCTTGCCG---ATTTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTA 3510625
Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
| ||||| ||||| | |||| || |||||||| |||||
Sbjct 3510624 TTGGTAGTTGAAGTCCCTGTCGTAGACAATGGCCGAGTTCAA 3510583
>seq6
Length=3486194
Score = 138 bits (152), Expect = 1e-27
Identities = 332/495 (67%), Gaps = 18/495 (4%)
Strand=Plus/Plus
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863
|| || ||| | || || || |||||||| || |||||||| || ||||||| || |
Sbjct 2268381 ATGGAGAACATCCACTCCGAGATGTATTCACTCCTCATCGACACATACGTGAGCGATCCC 2268440
Query 57864 GACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922
| ||||| || || |||||| | || ||||| || || || ||| |||||||||
Sbjct 2268441 AAAGAGAAGACCTAC-CTGTTCGATGCTATCGACACCATCCCTTGCATCCGCAAGAAGGC 2268499
Query 57923 AGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978
|| ||| | | | |||||| | ||| | |||| ||||| | | ||
Sbjct 2268500 CGACTGGGCTCTTAGATGGATCTCTGATAAGGA----GTCCACTTTCGCTCAACGACTGG 2268555
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
| || ||||| |||||||| ||||| |||||||| || ||||| || || || |||
Sbjct 2268556 TTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATTTGCTGCGATTTTCTGGC 2268615
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
| |||| ||||||||||| || || || ||| || || | || || || || |
Sbjct 2268616 TCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATG 2268675
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA----TAAACCG 58154
|||| | || || |||||||| ||||| | || ||| | |||| | |||
Sbjct 2268676 AGGGCATGCACACAGATTTTGCATGCCT--CCTCCTGCAACA-TCTCAAGCACAAGCCCG 2268732
Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
|| | | | ||| | | | |||| ||| || ||||| || ||||| |||||| |
Sbjct 2268733 AC-CCAAAGCTCATTGAGAATGTCATCATCGAAGCAGTCGCTATTGAAAAAGAGTTTCTA 2268791
Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274
|| ||||| || || || | |||| || |||||| | | |||| ||||||||
Sbjct 2268792 ACTGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAACTCCAAGCTCATGTGCCAGTACATT 2268851
Query 58275 GAGTTTGTTGCCGAC 58289
|||||||| ||||||
Sbjct 2268852 GAGTTTGTCGCCGAC 2268866
>seq5
Length=3889323
Score = 118 bits (130), Expect = 9e-22
Identities = 160/220 (73%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
||| |||||| || ||||| ||||| || || ||||| || |||||| | || |||||
Sbjct 1366115 CAATCATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTTGAGT 1366174
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGC 31304
|| ||||| |||| | ||||| ||| || | | ||||||||||||| | || |
Sbjct 1366175 CGAGCGACACCATCGACAATGTCAA---GAGCAAGATCCAGGACAAGGAAGGCATTCCTC 1366231
Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364
| || |||||||| || || |||||||| |||||| | || || || ||||||
Sbjct 1366232 CTGATCAGCAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCG 1366291
Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||| ||||| || ||||| ||||| || || |||| ||
Sbjct 1366292 ATTACAACATCCAGAAAGAGTCGACACTGCACTTGGTCCT 1366331
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| || || ||||| || ||||| | || || ||| | ||
Sbjct 1366575 CATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACTATCACGCTAGAGGTCGAATCCTC 1366634
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | || | ||||| || ||| |||||||| || | || ||||||||
Sbjct 1366635 GGATACAATTGACAACGTCAAGTCGAAAATTCAAGACAAGGAGGGTATCCCACCCGACCA 1366694
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTAT 31369
|||||| | || ||||| ||||| ||| | || ||| | | || | | || ||
Sbjct 1366695 GCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGAACGCTCTCA--GACTAC 1366752
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||| || || ||||| || || ||||| | || ||||
Sbjct 1366753 AACATCCAGAAGGAATCCACCCTCCATCTCGTTCTCAGACTTCGTGGTGGTA 1366804
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| |||| ||||| || || || | || ||||| ||
Sbjct 1366804 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACATTGGAAGTTGAGAGCTCA 1366863
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| || || ||||||||| ||| | || |||||||||
Sbjct 1366864 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAG 1366923
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || ||||| ||||| ||| | |||||| || || ||| || |||
Sbjct 1366924 CAGAGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGAACGCTGTCCGACTACAAC 1366983
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| || || ||| | || ||||| || |||||| | ||||||
Sbjct 1366984 ATTCAGAAGGAGAGCACTTTGCACCTGGTGCTGAGACTGCGTGGCGGT 1367031
>seq1
Length=6061779
Score = 93.3 bits (102), Expect = 4e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| |||| || ||| | || |||| ||
Sbjct 4126399 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 4126340
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | |||||| | || |||||||| ||| | || |||||||||||||| ||
Sbjct 4126339 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCCGACCAGCAGCGACTG 4126280
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| ||||| ||||| || | |||||| || ||||||| || || || |||||
Sbjct 4126279 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATCCAAAA 4126221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766327562960
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