Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 6e-22
seq6 104 5e-17
>seq4
Length=4310093
Score = 120 bits (132), Expect = 6e-22
Identities = 181/255 (71%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || ||||| ||||||||||| || || ||| || || ||||| || |||
Sbjct 3510938 CCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCC 3510879
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904
|| ||||||||||| | | | | | | |||||| ||||| || ||||| |||| |||
Sbjct 3510878 TCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTG-GTGT 3510820
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || || ||||| || ||||| ||||| | | | ||||| || | ||
Sbjct 3510819 TCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTA 3510760
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| |||||| | || || ||||| || || ||||||||||||||||||||
Sbjct 3510759 TGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAACAGCCACACGCATAATCAT 3510700
Query 95025 GTCCTGAGGGCGCTC 95039
|| ||| || || ||
Sbjct 3510699 GTGCTGTGGTCGTTC 3510685
Score = 84.2 bits (92), Expect = 4e-11
Identities = 93/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 93610 TACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGAT 93669
|| |||||||| || | ||||||||| |||| |||||| || ||||| | || ||
Sbjct 3512069 TAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGAC 3512010
Query 93670 GCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACCATACTTCATAATGTC--CC 93727
|| |||||||| |||||||| | | || ||| ||||||||||||| |||||| ||
Sbjct 3512009 GCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCATACTTGGCAATGTCGGCC 3511950
Query 93728 TTC 93730
|||
Sbjct 3511949 TTC 3511947
>seq6
Length=3486194
Score = 104 bits (114), Expect = 5e-17
Identities = 224/333 (67%), Gaps = 9/333 (3%)
Strand=Plus/Plus
Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961
||| || ||| | | ||||| || || || || || || ||||||||| ||| ||||
Sbjct 2268539 TTTCGCTCAACGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATT 2268598
Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021
|| | ||||||||| |||||| || ||| | ||||||||||||||| || |||||
Sbjct 2268599 TGCTGCGATTTTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGA 2268658
Query 102022 GTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGG 102081
|||| ||| | || || || | || || ||||||||| | || || || |
Sbjct 2268659 ACTCATCTCTCGTGATGAGGGCATGCACACAGATTTTGCATGCCTCCTCCTGCAACA-TC 2268717
Query 102082 TTTTGTTGATACCCCATCAAGAGAAAGGATTCTTGAAATTG---TCACTGAAGCCGTCCG 102138
| | | ||| | | || | | |||| | || ||| ||||| |||
Sbjct 2268718 TCAAGCACAAGCCCGACC-----CAAAGCTCATTGAGAATGTCATCATCGAAGCAGTCGC 2268772
Query 102139 AATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAA 102198
|||||| |||| ||||| || | | || ||||| || |||| ||||||| |||
Sbjct 2268773 TATTGAAAAAGAGTTTCTAACTGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAACTCCAA 2268832
Query 102199 GTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231
| | ||| ||||||||||||| ||||| || ||
Sbjct 2268833 GCTCATGTGCCAGTACATTGAGTTTGTCGCCGA 2268865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583835172415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |