Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 194 2e-44 >seq4 Length=4310093 Score = 194 bits (214), Expect = 2e-44 Identities = 384/561 (68%), Gaps = 8/561 (1%) Strand=Plus/Minus Query 66135 TTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCC 66194 |||||| | |||| | ||| | | | |||| ||||| || |||| ||| ||||| Sbjct 3511142 TTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 3511083 Query 66195 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 66254 | | | ||||| || ||||| || ||||| || | ||| | || || || || |||| Sbjct 3511082 AAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACA 3511023 Query 66255 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTT 66314 | |||||| ||||| | ||||| ||||| ||||| || || | || ||| ||| || Sbjct 3511022 CGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTT 3510963 Query 66315 GCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 66372 ||||| || | | ||||| |||| || || || || | || ||||| | || | Sbjct 3510962 GCACGGATGCAGTGGGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCAC 3510905 Query 66373 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 66432 | || | || |||||||||||||| || ||||||||| |||||| | | || | Sbjct 3510904 AGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGC 3510845 Query 66433 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492 || |||| ||| | | ||||| ||||| || | || || || || || |||| Sbjct 3510844 AGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAA 3510785 Query 66493 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 66551 | || || | || | || ||||| |||||||| | || ||||| || | || Sbjct 3510784 AGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCG-TGG 3510726 Query 66552 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTAT 66610 || || || || |||||||| | ||||||||| |||| ||| ||| |||| ||| || Sbjct 3510725 ATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGAT 3510667 Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 66670 ||||| || ||| || || ||||| || || |||||||| || | ||| ||||| | Sbjct 3510666 TTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCT 3510607 Query 66671 TTCGTAAATAATAACCGAGTT 66691 ||||| | ||| ||||||| Sbjct 3510606 GTCGTAGACAATGGCCGAGTT 3510586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172693046920