Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5 132 5e-26 >seq5 Length=3889323 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || ||||| | || |||||||| || ||||| |||||||| Sbjct 1366347 GCCACCACGGAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCT 1366288 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || ||||||||||||||||| |||| || || |||||||| ||||| Sbjct 1366287 CAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGG 1366228 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| || || | | || | |||||| | | ||| || Sbjct 1366227 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAAC 1366168 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | ||||||||||| | || || ||||| || ||||| Sbjct 1366167 CTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1366120 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||||||||| || || || ||| | |||| |||||| || || || ||| Sbjct 1366544 GTCGACTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCA 1366485 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| |||||||||||||||||||| ||||| || ||||| ||| || || Sbjct 1366484 GCAAAGATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTG 1366425 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || ||| | | ||| ||||||| ||| | ||||||||||| | || Sbjct 1366424 ACGTTGTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTC 1366365 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| |||||||| Sbjct 1366364 TTGACGAAGATTTGCAT 1366348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063919389600