Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 7e-18
seq6 91.5 1e-13
>seq5
Length=3889323
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || || | ||| | || || || | ||| || ||||| || ||||||||||||||
Sbjct 1366347 GCCACCACGGAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCT 1366288
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| |||| || ||||| ||||||||||| |||| || || |||||||| |||||
Sbjct 1366287 CAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGG 1366228
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|||||||| ||||| || || || | | || | ||||| | | || ||
Sbjct 1366227 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAAC 1366168
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||||||||| | || || ||||| || |||||
Sbjct 1366167 CTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1366120
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || || | ||| | || | ||| | || || |||||||| || ||||| |||
Sbjct 1366575 GCCACCACGGAGACGGAGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGA 1366516
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| |||| |||||| ||||| || |||||| |||| ||||||||||||||||||||
Sbjct 1366515 AAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGG 1366456
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
||||| || ||||| || || || | | || | || || | | || ||
Sbjct 1366455 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCGAC 1366396
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||||||||| | || || ||||| ||||||||
Sbjct 1366395 CTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348
>seq6
Length=3486194
Score = 91.5 bits (100), Expect = 1e-13
Identities = 126/172 (73%), Gaps = 6/172 (3%)
Strand=Plus/Plus
Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691
||||| |||| || |||||||||||| | || || || | || || | ||| |||||
Sbjct 2268762 GAAGCAGTCGCTATTGAAAAAGAGTTTCTAACTGAAGCGCTCCCTGTCGGTTTGCTGGGC 2268821
Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTG-TTGCA 50750
|||||| | | | |||||| |||||||||||||||| || ||| | ||| || ||||
Sbjct 2268822 ATGAACTCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGGTTGCTGCTTGC- 2268880
Query 50751 GCTGGG--ACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGA 50800
|||| |||| || | ||| ||||| | ||||| ||||| ||| |||
Sbjct 2268881 CATGGGCAACAAGCG--AGTCTACAATGCTCAGAACCCATTTCCATTTGTGA 2268930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014317610160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |