Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 147 3e-30 seq4 134 2e-26 >seq6 Length=3486194 Score = 147 bits (162), Expect = 3e-30 Identities = 345/513 (67%), Gaps = 17/513 (3%) Strand=Plus/Plus Query 125244 TTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTAC 125303 |||||| | ||||| |||||| | ||||| || ||||| || || || |||| ||| Sbjct 2268369 TTCCAAGTTATGATGGAGAACATCCACTCCGAGATGTATTCACTCCTCATCGACACATAC 2268428 Query 125304 ATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTAT 125362 | ||||||| ||| | || || | | | || | || |||||||| | || | || Sbjct 2268429 GTGAGCGATCC-CAAAGAGAAGACCTACCTGTTCGATGCTATCGACACCATCCCTTGCAT 2268487 Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422 || || ||||| | |||| || | |||||| ||| | |||| | | ||| | Sbjct 2268488 CCGCAAGAAGGCCGACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTCGCTCA 2268547 Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482 ||||||| || ||||| ||||| ||||| ||||||||||| || ||||| || || Sbjct 2268548 ACGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATTTGCTGCGAT 2268607 Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542 || |||||||||| || || ||||| || || || || || | || || Sbjct 2268608 TTTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGAACTCATCTC 2268667 Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCC 125602 ||| || |||||| | ||| || ||||| || || | ||||| |||| Sbjct 2268668 TCGTGATGAGGGCATGCACACAGATTTTGCATGCCTCCTCCT--GCAAC-ATCT------ 2268718 Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTG---TAACCGATGCCGTGAGGAT 125659 | || || | || ||| |||| |||| | | || | | ||| || || || Sbjct 2268719 CAAGCACA-AGCC--CGACCCAAAGCTCATTGAGAATGTCATCATCGAAGCAGTCGCTAT 2268775 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCT 125719 ||| ||||||||||||| ||| | || || ||| | || | |||||||||| |||||| Sbjct 2268776 TGAAAAAGAGTTTCTAACTGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAACTCCAAGCT 2268835 Query 125720 AATGTGCGAGTACATAGAGTTTGTGGCAGATCG 125752 |||||| ||||||| |||||||| || || || Sbjct 2268836 CATGTGCCAGTACATTGAGTTTGTCGCCGACCG 2268868 >seq4 Length=4310093 Score = 134 bits (148), Expect = 2e-26 Identities = 328/487 (67%), Gaps = 10/487 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || || || || ||| | ||| ||||| |||| || |||||||| || Sbjct 3511054 CAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCTGAT 3511113 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||||||| | | | | || ||| ||| ||||| | || ||| | ||| Sbjct 3511114 GTCTTTGACTTCTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGAC 3511173 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC--GACGGTGGCT 97053 |||| ||||| | ||| || || ||||||||| |||| ||| | || || Sbjct 3511174 CTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGG-- 3511231 Query 97054 ACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGT 97113 | |||| || | ||||| | |||| || ||| | ||| || ||||| |||| Sbjct 3511232 AATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGTCTACGGCGATGAGT 3511291 Query 97114 TTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATAC-GTGAGACGAGTCGATGCA 97172 || ||| ||| | || || | |||||||| | || |||| ||| | || Sbjct 3511292 TTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCAGACC-GTCAAGGCC 3511350 Query 97173 CGAGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| |||||| | || || | ||| ||||||| ||||| || ||||| ||||| | Sbjct 3511351 C-AGAAGCTGTGGTATGCGATTCTTGA-GGCTCAGACCGAGACCGGTACTCCCTACATGC 3511408 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| || || | || |||||||| ||||||||||||| ||| Sbjct 3511409 TCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGCACCATTCGAAGCT 3511468 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 | ||||| ||||| || || || |||| | | | || |||||| || || ||| | Sbjct 3511469 CAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGACGAGGTTGCTGTCTGCAATT 3511528 Query 97351 TGGCATC 97357 |||| || Sbjct 3511529 TGGCTTC 3511535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059079577880