Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 2e-23
>seq5
Length=3889323
Score = 125 bits (138), Expect = 2e-23
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || ||||| || ||||| ||||| || || || | ||||||
Sbjct 1366559 AGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCT 1366500
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| ||||||||||| || || | || ||||| ||||| || || || || ||
Sbjct 1366499 TCAAGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCT 1366440
Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||| ||||| || || || || | ||||||||| | || ||||| || || || ||
Sbjct 1366439 TGGATC-TTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGT 1366381
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || || || || || || |||||
Sbjct 1366380 CTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348
Score = 113 bits (124), Expect = 1e-19
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421
||| || |||||||| || || || || || || | || || || || ||||| ||
Sbjct 1366317 TGTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACC 1366258
Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-T 104480
||| || || || | ||| ||||||||||| || ||||| || ||||| ||| ||||| |
Sbjct 1366257 AGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATC-TTGCTCT 1366199
Query 104481 TTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
| ||||| || | ||| ||||| | || ||||| || || || ||||| || || || |
Sbjct 1366198 TGACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGG 1366139
Query 104541 TTTTTACAAATATCTGCAT 104559
| || || || ||||||||
Sbjct 1366138 TCTTGACGAAGATCTGCAT 1366120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398208220204
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |