Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_005885.1 Length=58638 Score E Sequences producing significant alignments: (Bits) Value seq1 80.6 1e-10 >seq1 Length=6061779 Score = 80.6 bits (88), Expect = 1e-10 Identities = 117/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Minus Query 41696 AACTGCGGCGTGCTCACCGAGGGGTTCGATGAGCCCTCGATCTCGTGCGTGGTGGTGGCC 41755 || ||||| || |||||||||| |||| |||| ||| || ||| || |||| Sbjct 5156812 AATTGCGGGGTTTTCACCGAGGGCACCGATATGCCCAACATCGATTGTGTGCTGCTGGCT 5156753 Query 41756 CGTCCGACCAAGTTCCACGG--CCTGTACGTCCAGATGATCGGCCGGGGGACGCGGCTGT 41813 || || ||||||| | ||| ||| |||||||||||||||||| || | ||| || Sbjct 5156752 CGGCCAACCAAGT--CGCGGAACCTTCTCGTCCAGATGATCGGCCGTGGCATGCGTCTAC 5156695 Query 41814 ACCCGGGCAAGAAAGAC-CTGATGATCTTGGACCTGGTGGC 41853 ||||||| ||||| ||| | ||| || | ||| ||||||| Sbjct 5156694 ACCCGGGAAAGAAGGACTGTCATG-TCATCGACATGGTGGC 5156655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187519971051600