Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 5e-35
seq5 125 1e-24
>seq1
Length=6061779
Score = 159 bits (176), Expect = 5e-35
Identities = 161/207 (78%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||| | ||||||| ||||| | || || ||||||||||| ||||| ||||| |||||
Sbjct 4260367 GCCAAGAGACATCGCAAGATCT-TGCGCGACAACATCCAAGGTATCACTAAGCCTGCTAT 4260425
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || ||||||||||| ||||||||| |||| | || |||| |||||||
Sbjct 4260426 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 4260485
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| ||||| ||||||| || | || |||| ||| || || ||| |||||
Sbjct 4260486 CCGTGGTGTCCTGAAGTCCTTCCTCGAGTCTGTCATCCGTGACGCCGTCACCTACACCGA 4260545
Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638
||||| || | ||||| ||||||||
Sbjct 4260546 ACACGCAAAGAGAAAGACCGTCACCTC 4260572
>seq5
Length=3889323
Score = 125 bits (138), Expect = 1e-24
Identities = 154/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||| | ||||||| ||| | | || || ||||||||||| ||||||||||| || |
Sbjct 2697252 CGCGAAGAGACATCGCAAGATTT-TGCGTGACAACATCCAAGGTATCACCAAGCCTGCCA 2697310
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | ||||| || || |||||||| ||||||||| |||| | || ||||||||||||
Sbjct 2697311 TCAGACGTCTTGCCCGACGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTATGAAGAGA 2697370
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | |||| |||||| | || |||| || || || ||| ||||
Sbjct 2697371 CCCGAGGTGTCCTCAAGACCTTCCTTGAAGGTGTCATCCGAGACGCCGTCACCTACACCG 2697430
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTC 16638
| ||||| || | ||||| ||||| ||
Sbjct 2697431 AACACGCAAAGAGAAAGACCGTCACTTC 2697458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075188114009
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |