Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4 190 3e-43
seq6 111 2e-19
>seq4
Length=4310093
Score = 190 bits (210), Expect = 3e-43
Identities = 383/561 (68%), Gaps = 8/561 (1%)
Strand=Plus/Minus
Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350
|||||| | |||| | ||| | | | ||||| ||||| || |||| ||| |||||
Sbjct 3511142 TTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 3511083
Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410
| | | ||||| || ||||| || ||||| || | ||| | || || || || ||||
Sbjct 3511082 AAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACA 3511023
Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470
| |||||| ||||| | || |||||| | ||||| || || | || ||| ||| |
Sbjct 3511022 CGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTT 3510963
Query 63471 GCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63528
||||| || | | ||||| |||| || || || || | || ||||| | || |
Sbjct 3510962 GCACGGATGCAGTGGGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCAC 3510905
Query 63529 ATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588
| || | ||||||||||| ||||| ||||||||||| |||||| | | || |
Sbjct 3510904 AGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGC 3510845
Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648
|| |||| ||| | | ||||| ||||| || | || || || || || ||||
Sbjct 3510844 AGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAA 3510785
Query 63649 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63707
| || || | || | || ||||| |||||||| | || ||||| || | ||
Sbjct 3510784 AGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCG-TGG 3510726
Query 63708 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTAT 63766
|| || || || |||||||| | ||||||||| |||| ||| ||| |||| ||| ||
Sbjct 3510725 ATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGAT 3510667
Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63826
||||| || ||| || || ||||| || || |||||||| || | ||| ||||| |
Sbjct 3510666 TTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCT 3510607
Query 63827 TTCGTAAATAATAACCGAGTT 63847
||||| | ||| |||||||
Sbjct 3510606 GTCGTAGACAATGGCCGAGTT 3510586
>seq6
Length=3486194
Score = 111 bits (122), Expect = 2e-19
Identities = 217/320 (68%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
||||| ||||| ||||| ||||| || | | || ||||| || ||||| |||||
Sbjct 2268700 CATGCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2268641
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| ||||| | || ||||| || || | ||| ||||||||||||||||||
Sbjct 2268640 CCAGGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAG 2268581
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33480
|| || || || || || || |||| |||| | | || || | | |||
Sbjct 2268580 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2268521
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
||||| | ||||||| ||||||||||| | ||||| || || || || ||||
Sbjct 2268520 ATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCG 2268461
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
|| || ||| | || || || ||| | || || || ||||| | || ||||||
Sbjct 2268460 AACAGGTAGGTCTTCTCTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATC 2268401
Query 33601 TCCGAATGAATGTTTTCAAT 33620
|| || || ||||| || ||
Sbjct 2268400 TCGGAGTGGATGTTCTCCAT 2268381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947098771080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |