Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 387 4e-102 >seq4 Length=4310093 Score = 387 bits (428), Expect = 4e-102 Identities = 1138/1732 (66%), Gaps = 40/1732 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || ||||| ||| | |||||||| ||| |||||||||| | ||| |||| Sbjct 3510685 GAACGACCACAGCACATGATTATGCGTGTGGCTGTTGGTATCCACGGTGACGATATTGAG 3510744 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565 | ||||| ||||| || ||| | || | | || || || || || | || | Sbjct 3510745 AAGACCATTGAGACATACAACCTTAT--GTCCCAGAAGTGCTTTACTCATGCGTCACCCA 3510802 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | |||||| ||||| | | || ||| |||| || ||||| | | | |||| Sbjct 3510803 CGCTCTTCAATGCCGGAACACCACAGCCCCAGCTGTCCTCCTGCTTCTTGATCGACATGA 3510862 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| ||| ||||||||| |||| ||||||||| |||| ||||| | || ||||||| Sbjct 3510863 AGGATGATAGCATCGAGGGCATCTATGACACACTCAAGACCTGTGCCATGATCTCCAAGA 3510922 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCG 363743 || || || || ||| | | || | || || | |||||| | |||||| Sbjct 3510923 CCGCTGGTGGCATCGGTCT--CAATGCCCACTGCATCCGTGCAACTGGCTCCTACATTGC 3510980 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || ||| || |||||||| |||| ||| | ||||| || ||||||| || Sbjct 3510981 AGGAACTAATGGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAACAATACGGC 3511040 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | |||||||||||||| || ||||| || || ||||| || || || ||||| Sbjct 3511041 CCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCC 3511100 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 || || ||| | ||||| |||||| | || | || ||| || || || ||| Sbjct 3511101 ATGGCACGCTGATGTCTTTGA-CTTCTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAG 3511159 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | ||||| ||||| ||||||||||| | ||| ||||| || ||| |||| || | Sbjct 3511160 TCCGTGCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCG 3511219 Query 363983 AGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 || | | | || | ||| | || || ||||| || ||| ||||| || | ||||| Sbjct 3511220 AG--AAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGT 3511277 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | || || || | | | || ||||| | |||||| |||||| | ||| | Sbjct 3511278 CTACGGCGATGAGTTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCA 3511337 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 ||| | || |||||||| |||| ||| || | || | |||| ||||| || || Sbjct 3511338 GACCGTCAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACCGAGACCGGTAC 3511397 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 ||||| ||| | ||||| ||| | |||||| | ||| ||||||| || || | || || Sbjct 3511398 TCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGCAC 3511457 Query 364221 AATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 |||| | || | || || || |||||||| | || | ||| || || |||||| || Sbjct 3511458 CATTC-GAAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGACGAGGTTG 3511516 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA------TGGTACTT 364333 | || || || | || || | || ||||| | || || | | ||| | Sbjct 3511517 CTGTCTGCAATTTGGCTTCCCTGGCCCTTCCCACCTTCGTCGACCAATCTCGTGGCGAGT 3511576 Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCA--TGCT-ACTTGCAATCTCGACAAGG 364390 |||| | | ||| |||| || || ||| || | || ||||| | |||| Sbjct 3511577 ATGACTTCGGTCGCCTTCATGAGGTCAC---TCAAGTGGTCACACGCAATTTGAACAAAA 3511633 Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCC 364450 | ||||||| || || ||||| | ||||| || || ||||||||| ||||| | Sbjct 3511634 TCATCGACATCAACTACTATCCCGTCCCTGAGGCGAAGAAGAGTAATATGCGCCATCGAC 3511693 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATT 364508 | ||||| ||||| || || || || || || | || | ||||| | | || Sbjct 3511694 CTATTGGCCTTGGGGTTCAAGGTCTTGCAGATGCCTTCCT--TGCTCTGCGTCTTCCCTT 3511751 Query 364509 TGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGC 364568 ||| || || || ||||| || || | |||||||||| || || || ||| || Sbjct 3511752 TGACTCTCCGGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATCTACCATGCGGC 3511811 Query 364569 AATGACTGCTTCGTGTGATTTGGCAA-AAACCAAGGGAAAGTACTCTACTTATGAGGGGT 364627 | ||||||||||| || | |||| | ||||| | | || || || ||||| Sbjct 3511812 TCTCACTGCTTCGTGCGAGCTTGCAAGGGAGCAAGGCACA-TATGAGACGTACGAGGGCA 3511870 Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687 ||| | || || || | |||||| ||| | ||||||||||| ||||||| || | Sbjct 3511871 GCCCAGTCTCACAAGGCATGCTCCAGTATGACATGTGGAATGTCACCCCATCTGACCTGT 3511930 Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCG 364744 || ||||||| | | || || || ||| ||||| ||||||||| ||||| Sbjct 3511931 GGGACTGGGACTCTTTGAAGGCCGACATTGCCAAGTATGGTGTTCGCAACTCTCTCCTCG 3511990 Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804 || || || ||||| || || || || | ||||| || || |||||||| ||||| | Sbjct 3511991 TT---GCTCCTATGCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTTG 3512047 Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864 | || | ||| ||| | || || || || || || | || || || | ||| || | Sbjct 3512048 AGCCATATACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCA 3512107 Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924 | || || | |||||||| ||| | || || ||| || | |||||||||| Sbjct 3512108 ACCCGTGGCTCTTGAAGGATCTGGTCGATCTGGGTCTCTGGTCAGATAACATGAAGAACC 3512167 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 ||||||||||| |||||| || |||||||| || | || | || | ||| Sbjct 3512168 GTATCATCGCCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAGG 3512227 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 | | ||||| || || |||||||| | |||||| || | | ||||||||||||| Sbjct 3512228 CACTGTACAAGACTGTCTGGGAAATCAGCCAACGAACTATCCTCCAGATGGCGGCCGATC 3512287 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | || || || ||| ||| ||| || || ||| | | ||| | || ||| | Sbjct 3512288 GGGGCGCCTTCATCGACCAGTCCCAATCCTTGAACATCCACTTGAAAGAACCCACCATGG 3512347 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||| | ||||||||||| || ||| |||||| ||||| || || || Sbjct 3512348 GCAAAATCACATCCATGCACTTTGCCGGCTGGAAAATGGGTCTCAAAACTGG 3512399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353382910166