Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4 387 4e-102
>seq4
Length=4310093
Score = 387 bits (428), Expect = 4e-102
Identities = 1138/1732 (66%), Gaps = 40/1732 (2%)
Strand=Plus/Plus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
||||| || ||||| ||| | |||||||| ||| |||||||||| | ||| ||||
Sbjct 3510685 GAACGACCACAGCACATGATTATGCGTGTGGCTGTTGGTATCCACGGTGACGATATTGAG 3510744
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565
| ||||| ||||| || ||| | || | | || || || || || | || |
Sbjct 3510745 AAGACCATTGAGACATACAACCTTAT--GTCCCAGAAGTGCTTTACTCATGCGTCACCCA 3510802
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| | | |||||| ||||| | | || ||| |||| || ||||| | | | ||||
Sbjct 3510803 CGCTCTTCAATGCCGGAACACCACAGCCCCAGCTGTCCTCCTGCTTCTTGATCGACATGA 3510862
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
|||| ||| ||||||||| |||| ||||||||| |||| ||||| | || |||||||
Sbjct 3510863 AGGATGATAGCATCGAGGGCATCTATGACACACTCAAGACCTGTGCCATGATCTCCAAGA 3510922
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCG 363743
|| || || || ||| | | || | || || | |||||| | ||||||
Sbjct 3510923 CCGCTGGTGGCATCGGTCT--CAATGCCCACTGCATCCGTGCAACTGGCTCCTACATTGC 3510980
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| || ||| || |||||||| |||| ||| | ||||| || ||||||| ||
Sbjct 3510981 AGGAACTAATGGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAACAATACGGC 3511040
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| |||||||||||||| || ||||| || || ||||| || || || |||||
Sbjct 3511041 CCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCC 3511100
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922
|| || ||| | ||||| |||||| | || | || ||| || || || |||
Sbjct 3511101 ATGGCACGCTGATGTCTTTGA-CTTCTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAG 3511159
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
| ||||| ||||| ||||||||||| | ||| ||||| || ||| |||| || |
Sbjct 3511160 TCCGTGCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCG 3511219
Query 363983 AGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040
|| | | | || | ||| | || || ||||| || ||| ||||| || | |||||
Sbjct 3511220 AG--AAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGT 3511277
Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100
| || || || | | | || ||||| | |||||| |||||| | ||| |
Sbjct 3511278 CTACGGCGATGAGTTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCA 3511337
Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160
||| | || |||||||| |||| ||| || | || | |||| ||||| || ||
Sbjct 3511338 GACCGTCAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACCGAGACCGGTAC 3511397
Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
||||| ||| | ||||| ||| | |||||| | ||| ||||||| || || | || ||
Sbjct 3511398 TCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGCAC 3511457
Query 364221 AATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
|||| | || | || || || |||||||| | || | ||| || || |||||| ||
Sbjct 3511458 CATTC-GAAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGACGAGGTTG 3511516
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA------TGGTACTT 364333
| || || || | || || | || ||||| | || || | | ||| |
Sbjct 3511517 CTGTCTGCAATTTGGCTTCCCTGGCCCTTCCCACCTTCGTCGACCAATCTCGTGGCGAGT 3511576
Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCA--TGCT-ACTTGCAATCTCGACAAGG 364390
|||| | | ||| |||| || || ||| || | || ||||| | ||||
Sbjct 3511577 ATGACTTCGGTCGCCTTCATGAGGTCAC---TCAAGTGGTCACACGCAATTTGAACAAAA 3511633
Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCC 364450
| ||||||| || || ||||| | ||||| || || ||||||||| ||||| |
Sbjct 3511634 TCATCGACATCAACTACTATCCCGTCCCTGAGGCGAAGAAGAGTAATATGCGCCATCGAC 3511693
Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATT 364508
| ||||| ||||| || || || || || || | || | ||||| | | ||
Sbjct 3511694 CTATTGGCCTTGGGGTTCAAGGTCTTGCAGATGCCTTCCT--TGCTCTGCGTCTTCCCTT 3511751
Query 364509 TGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGC 364568
||| || || || ||||| || || | |||||||||| || || || ||| ||
Sbjct 3511752 TGACTCTCCGGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATCTACCATGCGGC 3511811
Query 364569 AATGACTGCTTCGTGTGATTTGGCAA-AAACCAAGGGAAAGTACTCTACTTATGAGGGGT 364627
| ||||||||||| || | |||| | ||||| | | || || || |||||
Sbjct 3511812 TCTCACTGCTTCGTGCGAGCTTGCAAGGGAGCAAGGCACA-TATGAGACGTACGAGGGCA 3511870
Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687
||| | || || || | |||||| ||| | ||||||||||| ||||||| || |
Sbjct 3511871 GCCCAGTCTCACAAGGCATGCTCCAGTATGACATGTGGAATGTCACCCCATCTGACCTGT 3511930
Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCG 364744
|| ||||||| | | || || || ||| ||||| ||||||||| |||||
Sbjct 3511931 GGGACTGGGACTCTTTGAAGGCCGACATTGCCAAGTATGGTGTTCGCAACTCTCTCCTCG 3511990
Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804
|| || || ||||| || || || || | ||||| || || |||||||| ||||| |
Sbjct 3511991 TT---GCTCCTATGCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTTG 3512047
Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864
| || | ||| ||| | || || || || || || | || || || | ||| || |
Sbjct 3512048 AGCCATATACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCA 3512107
Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924
| || || | |||||||| ||| | || || ||| || | ||||||||||
Sbjct 3512108 ACCCGTGGCTCTTGAAGGATCTGGTCGATCTGGGTCTCTGGTCAGATAACATGAAGAACC 3512167
Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984
||||||||||| |||||| || |||||||| || | || | || | |||
Sbjct 3512168 GTATCATCGCCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAGG 3512227
Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044
| | ||||| || || |||||||| | |||||| || | | |||||||||||||
Sbjct 3512228 CACTGTACAAGACTGTCTGGGAAATCAGCCAACGAACTATCCTCCAGATGGCGGCCGATC 3512287
Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104
| || || || ||| ||| ||| || || ||| | | ||| | || ||| |
Sbjct 3512288 GGGGCGCCTTCATCGACCAGTCCCAATCCTTGAACATCCACTTGAAAGAACCCACCATGG 3512347
Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| | ||||||||||| || ||| |||||| ||||| || || ||
Sbjct 3512348 GCAAAATCACATCCATGCACTTTGCCGGCTGGAAAATGGGTCTCAAAACTGG 3512399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353382910166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |