Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 4e-14 seq1 89.7 4e-13 >seq5 Length=3889323 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| | || || ||| | | | Sbjct 1366120 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTTGAGTCGAGC 1366179 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 1366180 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 1366239 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || || || || ||||| |||| | | | | | |||||||| ||| Sbjct 1366240 CAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGATTACAAC 1366299 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||| || ||| | || || || Sbjct 1366300 ATCCAGAAAGAGTCGACACTGCACTTGGT 1366328 >seq1 Length=6061779 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| ||||| || ||||| ||||| | |||||| ||||| ||| Sbjct 4126372 ATCACCCTCGAGGTCGAATCCTCAGACACAATCGACAATGTCAAATCCAAGATCCAAGAC 4126313 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || ||||| || ||| ||||||| | || |||||||||||||||||| Sbjct 4126312 AAGGAGGGCATCCCACCCGACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGAC 4126253 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | | | | ||||| || || || ||||| Sbjct 4126252 GGCCGTACGTTGAGCGACTACAATATCCAAAA 4126221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935931882015