Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 4e-14
seq1 89.7 4e-13
>seq5
Length=3889323
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| | || || ||| | | |
Sbjct 1366120 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTTGAGTCGAGC 1366179
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| |||||||| ||||| |||||
Sbjct 1366180 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 1366239
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | || || | || || || || ||||| |||| | | | | | |||||||| |||
Sbjct 1366240 CAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGATTACAAC 1366299
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199
|| || ||||| || ||| | || || ||
Sbjct 1366300 ATCCAGAAAGAGTCGACACTGCACTTGGT 1366328
>seq1
Length=6061779
Score = 89.7 bits (98), Expect = 4e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| ||||| || ||||| ||||| | |||||| ||||| |||
Sbjct 4126372 ATCACCCTCGAGGTCGAATCCTCAGACACAATCGACAATGTCAAATCCAAGATCCAAGAC 4126313
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || ||||| || ||| ||||||| | || ||||||||||||||||||
Sbjct 4126312 AAGGAGGGCATCCCACCCGACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGAC 4126253
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | | | | ||||| || || || |||||
Sbjct 4126252 GGCCGTACGTTGAGCGACTACAATATCCAAAA 4126221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935931882015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |