Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 2e-25
seq6 116 3e-21
seq1 87.8 2e-12
>seq5
Length=3889323
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || || || | |||||||| || || ||||||||||||||
Sbjct 1366347 GCCACCACGGAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCT 1366288
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||||| ||||| || || ||| |||| | |||||||| || |||||
Sbjct 1366287 CAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGG 1366228
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 1366227 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAAC 1366168
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || ||||| || || || ||||| ||||||||||
Sbjct 1366167 CTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGA 1366118
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
|| || | ||| | ||| || ||||| || |||||||| || | || || ||||
Sbjct 1366787 AGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCC 1366728
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| ||||||||||| ||| |||| || ||||||||||| || ||||| || || |||||
Sbjct 1366727 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCT 1366668
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
|||||| ||||| | || | ||||| | ||| |||| || | || | ||
Sbjct 1366667 TGAATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTC 1366608
Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| || || || || || ||||| || ||||||
Sbjct 1366607 TTGCCCGTGAGGGTCTTCACGAAGATTTGCATG 1366575
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| ||||||||||| ||| || || || ||| || ||||||||||| ||| |
Sbjct 1366995 CTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAA 1366936
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| || | ||||||||| || ||||| || || ||||| ||| ||| ||||| |
Sbjct 1366935 GATCAATCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 1366876
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || || | | ||| | || | |||| ||| || ||||| | || || ||
Sbjct 1366875 GTCAATGGTGTCTGAGCTCTCAACTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGAC 1366816
Query 131223 GAAAATCTGCAT 131234
||| ||||||||
Sbjct 1366815 GAAGATCTGCAT 1366804
>seq6
Length=3486194
Score = 116 bits (128), Expect = 3e-21
Identities = 274/408 (67%), Gaps = 17/408 (4%)
Strand=Plus/Plus
Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATC----AACAGCAGCAC 46139
|| || ||| | |||||||| |||||||||| | | |||||| | || || |
Sbjct 2268477 ATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCC 2268536
Query 46140 CGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGG 46199
|||||||| | || |||| || || || || ||||| |||| ||||||||
Sbjct 2268537 ----ACTTTCGCTCAACGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGG 2268592
Query 46200 CAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAG 46259
||||| || || || | |||| | ||||||| | ||||| || || || |||
Sbjct 2268593 ATCATTTGCTGCGATTTTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTC 2268652
Query 46260 CAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC-TACTATA 46318
|| || || || || || || |||||| |||| || || ||||| || ||| | || |
Sbjct 2268653 AAATGAACTCATCTCTCGTGATGAGGGCATGCACACAGATTTTGCATGCCTCCTCCTGCA 2268712
Query 46319 ACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGT--TCAAGGAGGC 46376
||| || | |||| |||| || || | | | |||| |||| ||| || ||
Sbjct 2268713 ACA-TCTCAAGCAC---AAGCC--CGACCCAAAGCTCATTGAGAATGTCATCATCGAAGC 2268766
Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436
|| || ||||| || |||||| | || | || || || | | |||||||||||||
Sbjct 2268767 AGTCGCTATTGAAAAAGAGTTTCTAACTGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAA 2268826
Query 46437 CGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCT 46484
| | || |||||| | ||||| |||||||| || ||||| ||||
Sbjct 2268827 CTCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGGTTGCT 2268874
>seq1
Length=6061779
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
||||||| || ||||| ||||||| || || ||| || || |||||||| ||| |||
Sbjct 4126219 CCTTTTGGATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 4126278
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||| || ||||| || || ||||| ||| || |||| | |
Sbjct 4126279 TCAGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 4126338
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | ||| |||| |||| ||| | ||| || || || || || || ||||
Sbjct 4126339 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 4126398
Query 131225 A 131225
|
Sbjct 4126399 A 4126399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012723297920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |