Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5 131 2e-25 seq6 116 3e-21 seq1 87.8 2e-12 >seq5 Length=3889323 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || || || | |||||||| || || |||||||||||||| Sbjct 1366347 GCCACCACGGAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCT 1366288 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||| || || ||| |||| | |||||||| || ||||| Sbjct 1366287 CAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGG 1366228 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 1366227 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAAC 1366168 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || ||||| || || || ||||| |||||||||| Sbjct 1366167 CTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGA 1366118 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || | ||| | ||| || ||||| || |||||||| || | || || |||| Sbjct 1366787 AGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCC 1366728 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||||||||| ||| |||| || ||||||||||| || ||||| || || ||||| Sbjct 1366727 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCT 1366668 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 |||||| ||||| | || | ||||| | ||| |||| || | || | || Sbjct 1366667 TGAATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTC 1366608 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || || || ||||| || |||||| Sbjct 1366607 TTGCCCGTGAGGGTCTTCACGAAGATTTGCATG 1366575 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| ||| || || || ||| || ||||||||||| ||| | Sbjct 1366995 CTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAA 1366936 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| || | ||||||||| || ||||| || || ||||| ||| ||| ||||| | Sbjct 1366935 GATCAATCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 1366876 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | | ||| | || | |||| ||| || ||||| | || || || Sbjct 1366875 GTCAATGGTGTCTGAGCTCTCAACTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGAC 1366816 Query 131223 GAAAATCTGCAT 131234 ||| |||||||| Sbjct 1366815 GAAGATCTGCAT 1366804 >seq6 Length=3486194 Score = 116 bits (128), Expect = 3e-21 Identities = 274/408 (67%), Gaps = 17/408 (4%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATC----AACAGCAGCAC 46139 || || ||| | |||||||| |||||||||| | | |||||| | || || | Sbjct 2268477 ATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCC 2268536 Query 46140 CGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGG 46199 |||||||| | || |||| || || || || ||||| |||| |||||||| Sbjct 2268537 ----ACTTTCGCTCAACGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGG 2268592 Query 46200 CAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAG 46259 ||||| || || || | |||| | ||||||| | ||||| || || || ||| Sbjct 2268593 ATCATTTGCTGCGATTTTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTC 2268652 Query 46260 CAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC-TACTATA 46318 || || || || || || || |||||| |||| || || ||||| || ||| | || | Sbjct 2268653 AAATGAACTCATCTCTCGTGATGAGGGCATGCACACAGATTTTGCATGCCTCCTCCTGCA 2268712 Query 46319 ACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGT--TCAAGGAGGC 46376 ||| || | |||| |||| || || | | | |||| |||| ||| || || Sbjct 2268713 ACA-TCTCAAGCAC---AAGCC--CGACCCAAAGCTCATTGAGAATGTCATCATCGAAGC 2268766 Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436 || || ||||| || |||||| | || | || || || | | ||||||||||||| Sbjct 2268767 AGTCGCTATTGAAAAAGAGTTTCTAACTGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAA 2268826 Query 46437 CGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCT 46484 | | || |||||| | ||||| |||||||| || ||||| |||| Sbjct 2268827 CTCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGGTTGCT 2268874 >seq1 Length=6061779 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 ||||||| || ||||| ||||||| || || ||| || || |||||||| ||| ||| Sbjct 4126219 CCTTTTGGATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 4126278 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || ||||| || || ||||| ||| || |||| | | Sbjct 4126279 TCAGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 4126338 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | ||| |||| |||| ||| | ||| || || || || || || |||| Sbjct 4126339 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 4126398 Query 131225 A 131225 | Sbjct 4126399 A 4126399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012723297920