Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 210 3e-49 >seq4 Length=4310093 Score = 210 bits (232), Expect = 3e-49 Identities = 608/919 (66%), Gaps = 34/919 (4%) Strand=Plus/Minus Query 62801 ATCTCAGTGCAAAGATTACTACACTTG--ATGGTTCCTAAATTTTGTTGATTACTCTTTT 62858 ||||| ||||||||||| | ||| ||||| || || || | || || ||||| Sbjct 3511487 ATCTCGGTGCAAAGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCC 3511430 Query 62859 TGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAA 62918 |||| || |||||||| || || ||| | |||||||| || || |||||| || | || Sbjct 3511429 TGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAA 3511370 Query 62919 TCGCTTTCCAGACGACTC-GAGCCTTTA-----TTATAGATTTGTATCTC-TTTTC---T 62968 |||| | ||| | | || | ||||| | | | | | ||| ||||| | Sbjct 3511369 TCGCATACCACA-GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTCATAT 3511311 Query 62969 CTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA 63028 || ||||| || || || ||||| || || | |||| ||||||| || Sbjct 3511310 CTCTCGTAGAGC--------TCCTTA-AACTCATCGCCGTAGACATCAGCCAGTCCTGGT 3511260 Query 63029 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63088 ||||| || || | | | ||| || || | || || || | ||| || | Sbjct 3511259 GCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAG 3511200 Query 63089 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147 ||||| |||| | ||| ||| || || || | || | ||| || || || || Sbjct 3511199 TCAGGGGTCCACATAGC-ATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTT 3511141 Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207 |||| | |||| | ||| | | | ||||| ||||| || |||| ||| ||||| | Sbjct 3511140 CTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAA 3511081 Query 63208 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267 | | ||||| || ||||| || ||||| || | ||| | || || || || |||| | Sbjct 3511080 AGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACG 3511021 Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGC 63327 |||||| ||||| | ||||| ||||| ||||| || |||| || ||| ||| | || Sbjct 3511020 CAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGC 3510961 Query 63328 ACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385 ||| || | | ||||| |||| || || || || | || ||||| | || || Sbjct 3510960 ACGGATGCAGTGGGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAG 3510903 Query 63386 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 63445 || | || |||||||||||||| || ||||||||| |||||| | | || ||| Sbjct 3510902 GTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAG 3510843 Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 |||| ||| | | ||||| ||||| || | || || || || |||||||| Sbjct 3510842 GAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAG 3510783 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAAT 63564 || || | || | || ||||| |||||||| | || ||||| || | || || Sbjct 3510782 CACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCG-TGGAT 3510724 Query 63565 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTT 63623 || || || |||||||| | ||||||||| |||| ||| ||| |||| ||| |||| Sbjct 3510723 ACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATTT 3510665 Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63683 ||| || ||| || || ||||| || || |||||||| || | ||| ||||| | | Sbjct 3510664 TCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGT 3510605 Query 63684 CGTAAATAATAACCGAGTT 63702 |||| | ||| ||||||| Sbjct 3510604 CGTAGACAATGGCCGAGTT 3510586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631897034800