Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4 210 3e-49
>seq4
Length=4310093
Score = 210 bits (232), Expect = 3e-49
Identities = 608/919 (66%), Gaps = 34/919 (4%)
Strand=Plus/Minus
Query 62801 ATCTCAGTGCAAAGATTACTACACTTG--ATGGTTCCTAAATTTTGTTGATTACTCTTTT 62858
||||| ||||||||||| | ||| ||||| || || || | || || |||||
Sbjct 3511487 ATCTCGGTGCAAAGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCC 3511430
Query 62859 TGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAA 62918
|||| || |||||||| || || ||| | |||||||| || || |||||| || | ||
Sbjct 3511429 TGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAA 3511370
Query 62919 TCGCTTTCCAGACGACTC-GAGCCTTTA-----TTATAGATTTGTATCTC-TTTTC---T 62968
|||| | ||| | | || | ||||| | | | | | ||| ||||| |
Sbjct 3511369 TCGCATACCACA-GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTCATAT 3511311
Query 62969 CTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA 63028
|| ||||| || || || ||||| || || | |||| ||||||| ||
Sbjct 3511310 CTCTCGTAGAGC--------TCCTTA-AACTCATCGCCGTAGACATCAGCCAGTCCTGGT 3511260
Query 63029 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63088
||||| || || | | | ||| || || | || || || | ||| || |
Sbjct 3511259 GCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAG 3511200
Query 63089 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147
||||| |||| | ||| ||| || || || | || | ||| || || || ||
Sbjct 3511199 TCAGGGGTCCACATAGC-ATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTT 3511141
Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207
|||| | |||| | ||| | | | ||||| ||||| || |||| ||| ||||| |
Sbjct 3511140 CTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAA 3511081
Query 63208 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267
| | ||||| || ||||| || ||||| || | ||| | || || || || |||| |
Sbjct 3511080 AGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACG 3511021
Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGC 63327
|||||| ||||| | ||||| ||||| ||||| || |||| || ||| ||| | ||
Sbjct 3511020 CAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGC 3510961
Query 63328 ACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385
||| || | | ||||| |||| || || || || | || ||||| | || ||
Sbjct 3510960 ACGGATGCAGTGGGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAG 3510903
Query 63386 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 63445
|| | || |||||||||||||| || ||||||||| |||||| | | || |||
Sbjct 3510902 GTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAG 3510843
Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505
|||| ||| | | ||||| ||||| || | || || || || ||||||||
Sbjct 3510842 GAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAG 3510783
Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAAT 63564
|| || | || | || ||||| |||||||| | || ||||| || | || ||
Sbjct 3510782 CACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCG-TGGAT 3510724
Query 63565 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTT 63623
|| || || |||||||| | ||||||||| |||| ||| ||| |||| ||| ||||
Sbjct 3510723 ACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATTT 3510665
Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63683
||| || ||| || || ||||| || || |||||||| || | ||| ||||| | |
Sbjct 3510664 TCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGT 3510605
Query 63684 CGTAAATAATAACCGAGTT 63702
|||| | ||| |||||||
Sbjct 3510604 CGTAGACAATGGCCGAGTT 3510586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631897034800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |