Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 1e-25
seq4 91.5 1e-13
>seq5
Length=3889323
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | ||||| || || |||| ||||| || || | | |
Sbjct 1366348 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGAGC 1366407
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || || |||||||||||||| ||||| ||||||||
Sbjct 1366408 GATACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCAG 1366467
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| || || || | || || ||||||| | ||||| |||||
Sbjct 1366468 CAACGTCTCATCTTTGCTGGAAAGCAACTTGAAGACGGCCGCACCCTTTCCGACTACAAT 1366527
Query 22399 ATTCAAAAAGAATCCAC 22415
|| |||||||| || ||
Sbjct 1366528 ATCCAAAAAGAGTCGAC 1366544
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || || |||| || || || ||| || |
Sbjct 1366576 ATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACTATCACGCTAGAGGTCGAATCCTCG 1366635
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1366636 GATACAATTGACAACGTCAAGTCGAAAATTCAAGACAAGGAGGGTATCCCACCCGACCAG 1366695
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || |||||||| ||| | ||||| ||| || |||| || ||||||
Sbjct 1366696 CAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGAACGCTCTCAGACTACAAC 1366755
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || ||||||||| | ||| | ||| | || | || || |||
Sbjct 1366756 ATCCAGAAGGAATCCACCCTCCATCTCGTTCTCAGACTTCGTGGTGGT 1366803
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| ||||| || || | | |
Sbjct 1366120 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTTGAGTCGAGC 1366179
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || |||||||| || ||||| || |||||
Sbjct 1366180 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 1366239
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || || |||||| | |||||| ||||||| | ||||||||||
Sbjct 1366240 CAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGATTACAAC 1366299
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || ||||| || ||
Sbjct 1366300 ATCCAGAAAGAGTCGAC 1366316
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || ||||| || || | || | ||||| || | | |
Sbjct 1366804 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACATTGGAAGTTGAGAGCTCA 1366863
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || ||||||||||| || |||||||| ||
Sbjct 1366864 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAG 1366923
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || |||||||| ||| | || || ||| || | ||||| ||||||
Sbjct 1366924 CAGAGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGAACGCTGTCCGACTACAAC 1366983
Query 22399 ATTCAAAAAGA 22409
||||| || ||
Sbjct 1366984 ATTCAGAAGGA 1366994
>seq4
Length=4310093
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 129700 GAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCAC 129759
|| |||||||||||||| ||| |||| | || || ||||||| || |||| |||
Sbjct 3511535 GAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAACTCGACGATCTCGGTGCAA 3511476
Query 129760 AAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCT 129819
| ||| || |||||||||||| | ||| || || || ||| ||||||| |||||
Sbjct 3511475 AGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCC 3511416
Query 129820 TTGTACATCATGTACGGCGTGCCCGTTTCG 129849
||||| | |||||| || || || || |||
Sbjct 3511415 TTGTAGAGCATGTAGGGAGTACCGGTCTCG 3511386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727933499345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |